WormBase Tree Display for Gene: WBGene00020793
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| WBGene00020793 | SMap | S_parent | Sequence | T25D1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T25D1.1 | |||||||
| Molecular_name | T25D1.1 | ||||||||
| T25D1.1.1 | |||||||||
| CE53652 | |||||||||
| Other_name | CELE_T25D1.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | T25D1.1 | ||||||||
| DB_info | Database | AceView | gene | XR133 | |||||
| WormQTL | gene | WBGene00020793 | |||||||
| WormFlux | gene | WBGene00020793 | |||||||
| NDB | locus_tag | CELE_T25D1.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020793|UniProtKB=Q22779 | |||||||
| family | PTHR22921 | ||||||||
| NCBI | gene | 188889 | |||||||
| RefSeq | protein | NM_001375203.1 | |||||||
| TREEFAM | TREEFAM_ID | TF322399 | |||||||
| TrEMBL | UniProtAcc | Q22779 | |||||||
| UniProt_GCRP | UniProtAcc | Q22779 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (56) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (27) | |||||||||
| Paralog | WBGene00009951 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00012077 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00013658 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00015573 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00016487 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00044170 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | ||||||
| WBGene00020794 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00020027 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00022275 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in AFD and body wall muscle cell based on single-cell RNA-seq and RNA-seq studies. Is affected by several genes including eat-2; spr-5; and cyc-1 based on microarray and RNA-seq studies. Is affected by five chemicals including Rifampin; Psoralens; and Sirolimus based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T25D1.1 | |||||||
| Corresponding_CDS_history | T25D1.1:wp258 | ||||||||
| T25D1.1:wp272 | |||||||||
| Corresponding_transcript | T25D1.1.1 | ||||||||
| Other_sequence | MJ04848 | ||||||||
| MJ04866 | |||||||||
| MHC11685_1 | |||||||||
| Associated_feature | WBsf1008568 | ||||||||
| WBsf1008569 | |||||||||
| WBsf1008570 | |||||||||
| WBsf1008571 | |||||||||
| WBsf1008572 | |||||||||
| WBsf1008573 | |||||||||
| WBsf1024809 | |||||||||
| WBsf1024810 | |||||||||
| WBsf1024811 | |||||||||
| WBsf1024812 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00019204 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00054123 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1015475 | ||||||||
| Expr1157665 | |||||||||
| Expr2006495 | |||||||||
| Expr2024714 | |||||||||
| Drives_construct | WBCnstr00024882 | ||||||||
| Construct_product | WBCnstr00024882 | ||||||||
| Microarray_results (13) | |||||||||
| Expression_cluster (24) | |||||||||
| SAGE_tag | SAGE:ttttgataat | Strand | Antisense | ||||||
| Interaction | WBInteraction000224963 | ||||||||
| WBInteraction000267389 | |||||||||
| WBInteraction000268086 | |||||||||
| WBInteraction000567180 | |||||||||
| Map_info | Positive | Positive_clone | T25D1 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | 24.0137 | |||||||
| Reference | WBPaper00065080 | ||||||||
| Method | Gene |
