WormBase Tree Display for Gene: WBGene00020740

WBGene00020740 SMap: S_parent: Sequence: T23F4
  Identity: Version: 1
    Name: Sequence_name: T23F4.2
      Molecular_name (12)
      Other_name: CELE_T23F4.2 Accession_evidence: NDB BX284602
      Public_name: T23F4.2
    DB_info: Database: AceView gene 2B455
        WormQTL gene WBGene00020740
        WormFlux gene WBGene00020740
        NDB locus_tag CELE_T23F4.2
        Panther gene CAEEL|WormBase=T23F4.2b|UniProtKB=A0A0S4XRI4
          family PTHR38608
        NCBI gene 173501
        RefSeq protein NM_001318304.3
            NM_001318303.3
            NM_001318302.4
            NM_061522.5
        TrEMBL UniProtAcc A0A0S4XR68
            O17261
            A0A0S4XR74
            A0A0S4XRI4
        UniProt_GCRP UniProtAcc A0A0S4XRI4
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:03 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele: WBVar01499702
      WBVar00356351
      WBVar00356352
      WBVar00356353
      WBVar00356354
      WBVar02070610
      WBVar00164347
      WBVar00164348
      WBVar00164349
      WBVar01239217
      WBVar01476909
      WBVar01476910
      WBVar01476911
      WBVar01239228
      WBVar01574759
      WBVar01239239
      WBVar01500106
      WBVar02129303
      WBVar02106119
      WBVar01360544
      WBVar01705046
      WBVar01533375
      WBVar01933289
      WBVar01533376
      WBVar00233473
      WBVar01682738
      WBVar01682739
      WBVar01715968
      WBVar01715969
      WBVar01715970
      WBVar01435792
      WBVar01898225
      WBVar01694951
      WBVar01294046
      WBVar00036001
      WBVar00703456
      WBVar00703457
      WBVar00703458
      WBVar00036006
      WBVar00703459
      WBVar00703460
      WBVar00036011
      WBVar00703461
      WBVar00703462
      WBVar00703463
      WBVar00703464
      WBVar00703465
      WBVar00299498
      WBVar00703466
      WBVar00703467
      WBVar00703468
      WBVar00703469
      WBVar00703470
      WBVar00703471
      WBVar00703472
      WBVar00703473
      WBVar00703474
      WBVar00267898
      WBVar02151773
      WBVar00267899
      WBVar01959114
    RNASeq_FPKM (74)
    Ortholog: WBGene00029337 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00064617 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00160208 Caenorhabditis brenneri From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00124890 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00096956 Pristionchus pacificus From_analysis: Inparanoid_8
      CBOVI.g7323 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g137 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g18410 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP26.g19064 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g18280 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP31.g214 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g12129 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g6498 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g7999 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g24378 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00828.g14427 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-T23F4.2 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold605.g5652 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_02971.g28589 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_16412 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_008042 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g02389 Oscheius tipulae From_analysis: WormBase-Compara
      Sp34_20013000 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrII_pilon.g3306 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in amphid socket cell; head mesodermal cell; intestine; mechanosensory neurons; and rectal gland cell based on tiling array; proteomic; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; skn-1; and eat-2 based on microarray; proteomic; tiling array; and RNA-seq studies. Is affected by fifteen chemicals including rotenone; Rifampin; and stavudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T23F4.2a
      T23F4.2b
      T23F4.2c
      T23F4.2d
    Corresponding_CDS_history: T23F4.2:wp86
    Corresponding_transcript: T23F4.2a.1
      T23F4.2b.1
      T23F4.2c.1
      T23F4.2d.1
    Other_sequence (11)
    Associated_feature: WBsf986587
      WBsf986588
      WBsf1011497
  Experimental_info: RNAi_result: WBRNAi00053952 Inferred_automatically: RNAi_primary
      WBRNAi00103540 Inferred_automatically: RNAi_primary
      WBRNAi00035874 Inferred_automatically: RNAi_primary
      WBRNAi00019092 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1020198
      Expr1039034
      Expr1157497
      Expr2006413
      Expr2024632
    Microarray_results (19)
    Expression_cluster (186)
    Interaction: WBInteraction000434374
  Map_info: Positive: Positive_clone: T23F4 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II -15.5646
  Method: Gene