WormBase Tree Display for Gene: WBGene00020740
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| WBGene00020740 | SMap | S_parent | Sequence | T23F4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T23F4.2 | |||||||
| Molecular_name (12) | |||||||||
| Other_name | CELE_T23F4.2 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | T23F4.2 | ||||||||
| DB_info | Database | AceView | gene | 2B455 | |||||
| WormQTL | gene | WBGene00020740 | |||||||
| WormFlux | gene | WBGene00020740 | |||||||
| NDB | locus_tag | CELE_T23F4.2 | |||||||
| Panther | gene | CAEEL|WormBase=T23F4.2b|UniProtKB=A0A0S4XRI4 | |||||||
| family | PTHR38608 | ||||||||
| NCBI | gene | 173501 | |||||||
| RefSeq | protein | NM_001318304.3 | |||||||
| NM_001318303.3 | |||||||||
| NM_001318302.4 | |||||||||
| NM_061522.5 | |||||||||
| TrEMBL | UniProtAcc | A0A0S4XR68 | |||||||
| O17261 | |||||||||
| A0A0S4XR74 | |||||||||
| A0A0S4XRI4 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A0S4XRI4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele | WBVar01499702 | ||||||||
| WBVar00356351 | |||||||||
| WBVar00356352 | |||||||||
| WBVar00356353 | |||||||||
| WBVar00356354 | |||||||||
| WBVar02070610 | |||||||||
| WBVar00164347 | |||||||||
| WBVar00164348 | |||||||||
| WBVar00164349 | |||||||||
| WBVar01239217 | |||||||||
| WBVar01476909 | |||||||||
| WBVar01476910 | |||||||||
| WBVar01476911 | |||||||||
| WBVar01239228 | |||||||||
| WBVar01574759 | |||||||||
| WBVar01239239 | |||||||||
| WBVar01500106 | |||||||||
| WBVar02129303 | |||||||||
| WBVar02106119 | |||||||||
| WBVar01360544 | |||||||||
| WBVar01705046 | |||||||||
| WBVar01533375 | |||||||||
| WBVar01933289 | |||||||||
| WBVar01533376 | |||||||||
| WBVar00233473 | |||||||||
| WBVar01682738 | |||||||||
| WBVar01682739 | |||||||||
| WBVar01715968 | |||||||||
| WBVar01715969 | |||||||||
| WBVar01715970 | |||||||||
| WBVar01435792 | |||||||||
| WBVar01898225 | |||||||||
| WBVar01694951 | |||||||||
| WBVar01294046 | |||||||||
| WBVar00036001 | |||||||||
| WBVar00703456 | |||||||||
| WBVar00703457 | |||||||||
| WBVar00703458 | |||||||||
| WBVar00036006 | |||||||||
| WBVar00703459 | |||||||||
| WBVar00703460 | |||||||||
| WBVar00036011 | |||||||||
| WBVar00703461 | |||||||||
| WBVar00703462 | |||||||||
| WBVar00703463 | |||||||||
| WBVar00703464 | |||||||||
| WBVar00703465 | |||||||||
| WBVar00299498 | |||||||||
| WBVar00703466 | |||||||||
| WBVar00703467 | |||||||||
| WBVar00703468 | |||||||||
| WBVar00703469 | |||||||||
| WBVar00703470 | |||||||||
| WBVar00703471 | |||||||||
| WBVar00703472 | |||||||||
| WBVar00703473 | |||||||||
| WBVar00703474 | |||||||||
| WBVar00267898 | |||||||||
| WBVar02151773 | |||||||||
| WBVar00267899 | |||||||||
| WBVar01959114 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (24) | |||||||||
| Structured_description | Automated_description | Enriched in amphid socket cell; head mesodermal cell; intestine; mechanosensory neurons; and rectal gland cell based on tiling array; proteomic; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; skn-1; and eat-2 based on microarray; proteomic; tiling array; and RNA-seq studies. Is affected by fifteen chemicals including rotenone; Rifampin; and stavudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T23F4.2a | |||||||
| T23F4.2b | |||||||||
| T23F4.2c | |||||||||
| T23F4.2d | |||||||||
| Corresponding_CDS_history | T23F4.2:wp86 | ||||||||
| Corresponding_transcript | T23F4.2a.1 | ||||||||
| T23F4.2b.1 | |||||||||
| T23F4.2c.1 | |||||||||
| T23F4.2d.1 | |||||||||
| Other_sequence (11) | |||||||||
| Associated_feature | WBsf986587 | ||||||||
| WBsf986588 | |||||||||
| WBsf1011497 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00053952 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00103540 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035874 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00019092 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020198 | ||||||||
| Expr1039034 | |||||||||
| Expr1157497 | |||||||||
| Expr2006413 | |||||||||
| Expr2024632 | |||||||||
| Microarray_results | SMD_T23F4.2 | ||||||||
| 180240_at | |||||||||
| A_12_P118854 | |||||||||
| Aff_T23F4.2 | |||||||||
| GPL13394_WBGene00020740 | |||||||||
| GPL13914_T23F4.2 | |||||||||
| GPL14144_T23F4.2_289-348_0.930_4_C | |||||||||
| GPL14144_T23F4.2_430-489_0.949_1_A | |||||||||
| GPL14144_T23F4.2_517-576_0.927_6_B | |||||||||
| GPL19516_CGZ0036314 | |||||||||
| GPL21109_T23F4.2 | |||||||||
| GPL3518_CE32070 | |||||||||
| GPL8304_CE_WBGene00020740_A | |||||||||
| GPL8304_CE_WBGene00020740_B | |||||||||
| GPL8673_T23F4_2P00006 | |||||||||
| GPL8673_T23F4_2P00117 | |||||||||
| GPL8673_T23F4_2P00448 | |||||||||
| GPL9450_T23F4.2 | |||||||||
| cea2.p.47504 | |||||||||
| Expression_cluster (186) | |||||||||
| Interaction | WBInteraction000434374 | ||||||||
| Map_info | Positive | Positive_clone | T23F4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -15.5646 | |||||||
| Method | Gene |
