WormBase Tree Display for Gene: WBGene00020716
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WBGene00020716 | SMap | S_parent | Sequence | T23B12 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | phf-30 | Person_evidence | WBPerson260 | |||
Sequence_name | T23B12.1 | ||||||
Molecular_name | T23B12.1 | ||||||
T23B12.1.1 | |||||||
CE14026 | |||||||
Other_name | CELE_T23B12.1 | Accession_evidence | NDB | BX284605 | |||
Public_name | phf-30 | ||||||
DB_info | Database | AceView | gene | 5I951 | |||
WormQTL | gene | WBGene00020716 | |||||
WormFlux | gene | WBGene00020716 | |||||
NDB | locus_tag | CELE_T23B12.1 | |||||
Panther | gene | CAEEL|WormBase=WBGene00020716|UniProtKB=O17006 | |||||
family | PTHR13415 | ||||||
NCBI | gene | 188776 | |||||
RefSeq | protein | NM_072781.7 | |||||
TREEFAM | TREEFAM_ID | TF317416 | |||||
TrEMBL | UniProtAcc | O17006 | |||||
UniProt_GCRP | UniProtAcc | O17006 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | phf | ||||||
Allele (17) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00029145 | ||||||
00029146 | |||||||
Contained_in_operon | CEOP5192 | ||||||
Ortholog (22) | |||||||
Paralog | WBGene00018778 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | |||||||
Structured_description | Automated_description | Predicted to enable metal ion binding activity. Predicted to be located in nucleus. Is an ortholog of human INTS12 (integrator complex subunit 12). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | T23B12.1 | |||||
Corresponding_transcript | T23B12.1.1 | ||||||
Other_sequence | CRC07143_1 | ||||||
CR05055 | |||||||
CBC12627_1 | |||||||
Associated_feature | WBsf232114 | ||||||
WBsf232115 | |||||||
WBsf232116 | |||||||
Transcription_factor | WBTranscriptionFactor000488 | ||||||
Experimental_info | RNAi_result | WBRNAi00062379 | Inferred_automatically | RNAi_primary | |||
WBRNAi00069232 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00053881 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00113509 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00019054 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00035833 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1020915 | ||||||
Expr1039023 | |||||||
Expr1157428 | |||||||
Expr2014893 | |||||||
Expr2033128 | |||||||
Drives_construct | WBCnstr00024937 | ||||||
Construct_product | WBCnstr00024937 | ||||||
Microarray_results (21) | |||||||
Expression_cluster (110) | |||||||
Interaction | WBInteraction000264542 | ||||||
WBInteraction000269817 | |||||||
WBInteraction000273219 | |||||||
WBInteraction000306860 | |||||||
WBInteraction000326734 | |||||||
WBInteraction000361975 | |||||||
WBInteraction000435813 | |||||||
WBInteraction000442547 | |||||||
WBInteraction000527460 | |||||||
WBInteraction000548696 | |||||||
Map_info | Map | V | Position | 1.4248 | Error | 0.002557 | |
Positive | Positive_clone | T23B12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00027309 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |