WormBase Tree Display for Gene: WBGene00020716
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WBGene00020716 | SMap | S_parent | Sequence | T23B12 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | phf-30 | Person_evidence | WBPerson260 | |||||
Sequence_name | T23B12.1 | ||||||||
Molecular_name (3) | |||||||||
Other_name | CELE_T23B12.1 | Accession_evidence | NDB | BX284605 | |||||
Public_name | phf-30 | ||||||||
DB_info | Database | AceView | gene | 5I951 | |||||
WormQTL | gene | WBGene00020716 | |||||||
WormFlux | gene | WBGene00020716 | |||||||
NDB | locus_tag | CELE_T23B12.1 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00020716|UniProtKB=O17006 | |||||||
family | PTHR13415 | ||||||||
NCBI | gene | 188776 | |||||||
RefSeq | protein | NM_072781.7 | |||||||
TREEFAM | TREEFAM_ID | TF317416 | |||||||
TrEMBL | UniProtAcc | O17006 | |||||||
UniProt_GCRP | UniProtAcc | O17006 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 14 Oct 2011 15:24:19 | WBPerson2970 | Name_change | CGC_name | phf-30 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | phf | ||||||||
Allele (17) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00029145 | ||||||||
00029146 | |||||||||
Contained_in_operon | CEOP5192 | ||||||||
Ortholog (22) | |||||||||
Paralog | WBGene00018778 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Predicted to enable metal ion binding activity. Predicted to be located in nucleus. Is an ortholog of human INTS12 (integrator complex subunit 12). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | T23B12.1 | |||||||
Corresponding_transcript | T23B12.1.1 | ||||||||
Other_sequence | CRC07143_1 | ||||||||
CR05055 | |||||||||
CBC12627_1 | |||||||||
Associated_feature | WBsf232114 | ||||||||
WBsf232115 | |||||||||
WBsf232116 | |||||||||
Transcription_factor | WBTranscriptionFactor000488 | ||||||||
Experimental_info | RNAi_result | WBRNAi00062379 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00069232 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00053881 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00113509 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00019054 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00035833 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1020915 | ||||||||
Expr1039023 | |||||||||
Expr1157428 | |||||||||
Expr2014893 | |||||||||
Expr2033128 | |||||||||
Drives_construct | WBCnstr00024937 | ||||||||
Construct_product | WBCnstr00024937 | ||||||||
Microarray_results (21) | |||||||||
Expression_cluster (110) | |||||||||
Interaction | WBInteraction000264542 | ||||||||
WBInteraction000269817 | |||||||||
WBInteraction000273219 | |||||||||
WBInteraction000306860 | |||||||||
WBInteraction000326734 | |||||||||
WBInteraction000361975 | |||||||||
WBInteraction000435813 | |||||||||
WBInteraction000442547 | |||||||||
WBInteraction000527460 | |||||||||
WBInteraction000548696 | |||||||||
Map_info | Map | V | Position | 1.4248 | Error | 0.002557 | |||
Positive | Positive_clone | T23B12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00027309 | ||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |