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WormBase Tree Display for Gene: WBGene00020673

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Name Class

WBGene00020673SMapS_parentSequenceT22B7
IdentityVersion1
NameSequence_nameT22B7.4
Molecular_nameT22B7.4
T22B7.4.1
CE13946
Other_nameCELE_T22B7.4Accession_evidenceNDBBX284606
Public_nameT22B7.4
DB_infoDatabaseAceViewgeneXG258
WormQTLgeneWBGene00020673
WormFluxgeneWBGene00020673
NDBlocus_tagCELE_T22B7.4
PanthergeneCAEEL|WormBase=WBGene00020673|UniProtKB=Q23039
familyPTHR21539
NCBIgene180831
RefSeqproteinNM_076548.7
TREEFAMTREEFAM_IDTF314958
TrEMBLUniProtAccQ23039
UniProt_GCRPUniProtAccQ23039
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:03WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (46)
RNASeq_FPKM (74)
GO_annotation00077078
00077079
00077080
00077081
00125244
Ortholog (31)
ParalogWBGene00021205Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable methylated histone binding activity. Predicted to be located in nucleus. Predicted to be part of SAGA complex. Human ortholog(s) of this gene implicated in diabetic retinopathy. Is an ortholog of human SGF29 (SAGA complex associated factor 29).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:8947Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:25156)
Molecular_infoCorresponding_CDST22B7.4
Corresponding_transcriptT22B7.4.1
Associated_featureWBsf653993
WBsf653994
WBsf670539
WBsf1005326
WBsf237390
WBsf237391
Experimental_infoRNAi_resultWBRNAi00053796Inferred_automaticallyRNAi_primary
WBRNAi00035790Inferred_automaticallyRNAi_primary
Expr_pattern (5)
Drives_constructWBCnstr00024970
Construct_productWBCnstr00024970
Microarray_results (18)
Expression_clusterWBPaper00028788:MPK-1_Response_Weak
WBPaper00032976:dosage_compensated_genes
WBPaper00036375:enriched_in_PVD_OLL
WBPaper00037950:bodywall-muscle_larva_enriched
WBPaper00037950:dopaminergic-neurons_embryo_enriched
WBPaper00044736:flat_dev_expression
WBPaper00045486:starvation_downregulated
WBPaper00045521:Oogenic
WBPaper00046012:tdp-1(ok803)_upregulated
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
WBPaper00048923:Aging_regulated
WBPaper00048988:neuron_expressed
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_upregulated
WBPaper00049736:daf-2(e1370)_upregulated_15deg-then-25deg(12hr)
WBPaper00049920:Glucose-Diet_downregulated_hyl-2(tm2031)
WBPaper00049954:BPS_upregulated
WBPaper00050488:daf-2(e1370)_vs_daf-2(e1370);mir-34(gk437)_regulated_dauer_25C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050801:DAF-12_dauer_regulome
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00051039:germline_enriched
WBPaper00051265:F4_morc-1(tm6048)_upregulated
WBPaper00051352:Long-Term-Association-Memory_upregulated
WBPaper00053321:lin-15B(RNAi)_downregulated_starved-L1_Truseq
WBPaper00053321:mes-2(RNAi)_upregulated_fed-L1_Truseq
WBPaper00053321:mes-4(RNAi)_upregulated_fed-L1_Truseq
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_fed-L1_Truseq
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_starved-L1_Truseq
WBPaper00053321:PGCs_depleted_NuGen
WBPaper00053599:oocyte_vs_mitosis_downregulated
WBPaper00053814:15C_downregulated_PY79
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055386:daf-2(e1370)_downregulated
WBPaper00055482:Tunicamycin_upregulated
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00056161:hermaphrodite_enriched_siRNA
WBPaper00056284:ints-11(RNAi)_downregulated
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056826:SGP_biased
WBPaper00057083:daf-2(e1370)rsks-1(ok1255)_post-transcriptional_downregulated
WBPaper00059194:klf-1(RNAi)_regulated
WBPaper00059664:srbc-48(ac23)_downregulated
WBPaper00060459:bcat-1(RNAi)_downregulated
WBPaper00060764:swsn-1(os22ts)_downregulated
WBPaper00060886:met-2(n4256)_downregulated
WBPaper00060909:atfs-1(cmh15)_downregulated
WBPaper00061274:microgravity_upregulated
WBPaper00061340:ADL_parent
WBPaper00061340:ASG_AWA
WBPaper00061340:Neuroblast_ASG_AWA
WBPaper00061340:Neuroblast_ASH_RIB
WBPaper00061340:Neuroblast_AWC_SAAVx
WBPaper00061340:Neuroblast_BAG_SMDVx
WBPaper00061340:Parents_of_PHsh_hyp8_hyp9
WBPaper00061340:Parent_of_exc_gland_AVK
WBPaper00061340:RIA_parent
WBPaper00061340:RIM_parent
WBPaper00061439:unc-30(ok613)_downregulated
WBPaper00061527:dsh-1_3575-C40A11.4
WBPaper00062159:hda-2(ok1479)_downregulated
WBPaper00062193:hsf-1(RNAi)_downregulated
WBPaper00062193:skn-1(RNAi)_downregulated
WBPaper00062456:doxycycline_downregulated_CB4856_transcript
WBPaper00062456:doxycycline_downregulated_N2_transcript
WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064130:Beta-Amyloid_24h_downregulated_mRNA
WBPaper00064156:lipl-4(overexpress)_downregulated
WBPaper00064315:mes-3(bn199)_upregulated_PGCs
WBPaper00064716:paraquat_upregulated
WBPaper00064769:him-17(me24)_downregulated
WBPaper00064871:hypoxia_downregulated_F1
WBPaper00064939:vit-5(RNAi)_upregulated
WBPaper00065096:25C_vs_20C_upregulated
WBPaper00065096:Day10_vs_Day1_upregulated
WBPaper00065158:AFD_enriched
WBPaper00065945:epidermis-rpoa-2(-)_upregulated_transcript
WBPaper00065945:global-rpoa-2(-)_upregulated_transcript
WBPaper00065975:P-body_vs_oocyte_enriched
WBPaper00065975:P-body_vs_WholeAnimal_enriched
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066062:xrep-4(lax137)_upregulated
WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
cgc4386_cluster_5_1
cgc4489_group_9
WBPaper00025032:cluster_45
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00031532:Larva_Pan_Neuronal_Enriched
WBPaper00036123:Fluoranthene_regulated
WBPaper00036286:Pattern_D
WBPaper00036383:ash-2_Day8_regulated
WBPaper00040184:hcf-1nc_sir-2.1nc_daf-2down
WBPaper00040823:alg-1(gk214)_downregulated
WBPaper00040963:TA200_down
WBPaper00040963:TA300_down
WBPaper00041174:environmental
WBPaper00041174:genotype_environment_interaction
WBPaper00041174:genotypic
WBPaper00041174:genotypic_and_environmental
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041960:N2_fasting_upregulated_anytime
WBPaper00045263:0.1mM-paraquat_upregulated
[cgc5767]:cluster_26
[cgc5767]:expression_class_E
[cgc5767]:expression_class_E_pi(53_min)
[cgc5767]:expression_class_M
[cgc5767]:expression_class_ME
[cgc6390]:Cluster_E
[cgc6390]:herm_sex-enriched
Interaction (62)
Map_infoPositivePositive_cloneT22B7Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionX-4.42238
ReferenceWBPaper00038491
WBPaper00055090
WBPaper00065308
MethodGene