WormBase Tree Display for Gene: WBGene00020637
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| WBGene00020637 | SMap | S_parent | Sequence | T20H9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxa-7 | Person_evidence | WBPerson655 | |||||
| Sequence_name | T20H9.1 | ||||||||
| Molecular_name | T20H9.1 | ||||||||
| T20H9.1.1 | |||||||||
| CE39410 | |||||||||
| Other_name | CELE_T20H9.1 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | fbxa-7 | ||||||||
| DB_info | Database | AceView | gene | 3D336 | |||||
| WormQTL | gene | WBGene00020637 | |||||||
| WormFlux | gene | WBGene00020637 | |||||||
| NDB | locus_tag | CELE_T20H9.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020637|UniProtKB=O44892 | |||||||
| family | PTHR23015 | ||||||||
| NCBI | gene | 188664 | |||||||
| RefSeq | protein | NM_065122.3 | |||||||
| TREEFAM | TREEFAM_ID | TF322006 | |||||||
| TrEMBL | UniProtAcc | O44892 | |||||||
| UniProt_GCRP | UniProtAcc | O44892 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 12 Dec 2005 15:18:56 | WBPerson2970 | Name_change | CGC_name | fbxa-7 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxa | ||||||||
| Allele | WBVar01500082 | ||||||||
| WBVar02122456 | |||||||||
| WBVar01578615 | |||||||||
| WBVar00257835 | |||||||||
| WBVar00808536 | |||||||||
| WBVar00808537 | |||||||||
| WBVar00808538 | |||||||||
| WBVar00808539 | |||||||||
| WBVar00808540 | |||||||||
| WBVar00808541 | |||||||||
| WBVar00808542 | |||||||||
| WBVar00808543 | |||||||||
| WBVar00027816 | |||||||||
| WBVar00808544 | |||||||||
| WBVar00808545 | |||||||||
| WBVar00808546 | |||||||||
| WBVar00808547 | |||||||||
| WBVar00808548 | |||||||||
| WBVar00027831 | |||||||||
| WBVar01498832 | |||||||||
| WBVar01327255 | |||||||||
| WBVar00391594 | |||||||||
| WBVar01259137 | |||||||||
| WBVar01962075 | |||||||||
| WBVar01770954 | |||||||||
| WBVar01785164 | |||||||||
| WBVar00046288 | |||||||||
| WBVar01722118 | |||||||||
| WBVar00046293 | |||||||||
| WBVar01565556 | |||||||||
| WBVar01565557 | |||||||||
| WBVar01565558 | |||||||||
| WBVar01827081 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (42) | |||||||||
| Paralog (225) | |||||||||
| Structured_description | Automated_description | Enriched in intestine based on RNA-seq studies. Is affected by several genes including skn-1; sir-2.1; and lin-35 based on microarray; tiling array; and RNA-seq studies. Is affected by nine chemicals including Mercuric Chloride; allantoin; and Psoralens based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box-like domain superfamily; FTH domain; F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; and F-box A protein FB224. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T20H9.1 | |||||||
| Corresponding_CDS_history | T20H9.1:wp151 | ||||||||
| Corresponding_transcript | T20H9.1.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00006611 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00053677 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00018937 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1021540 | ||||||||
| Expr1157230 | |||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (69) | |||||||||
| Interaction (26) | |||||||||
| Map_info | Map | III | Position | -14.859 | Error | 0.002335 | |||
| Positive | Positive_clone | T20H9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
