WormBase Tree Display for Gene: WBGene00020587
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| WBGene00020587 | SMap | S_parent | Sequence | T19H12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ugt-9 | Person_evidence | WBPerson1208 | |||||
| WBPerson655 | |||||||||
| Sequence_name | T19H12.1 | ||||||||
| Molecular_name | T19H12.1a | ||||||||
| T19H12.1a.1 | |||||||||
| CE13752 | |||||||||
| T19H12.1b | |||||||||
| CE41265 | |||||||||
| T19H12.1b.1 | |||||||||
| Other_name | CELE_T19H12.1 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | ugt-9 | ||||||||
| DB_info | Database | WormQTL | gene | WBGene00020587 | |||||
| WormFlux | gene | WBGene00020587 | |||||||
| NDB | locus_tag | CELE_T19H12.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020587|UniProtKB=O01617 | |||||||
| family | PTHR48043 | ||||||||
| NCBI | gene | 178883 | |||||||
| RefSeq | protein | NM_001129547.5 | |||||||
| NM_071911.7 | |||||||||
| TREEFAM | TREEFAM_ID | TF352368 | |||||||
| TrEMBL | UniProtAcc | O01617 | |||||||
| H2KZ88 | |||||||||
| UniProt_GCRP | UniProtAcc | O01617 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 10 Jun 2005 11:17:00 | WBPerson2970 | Name_change | CGC_name | ugt-9 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ugt | ||||||||
| Allele (34) | |||||||||
| Strain | WBStrain00037851 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00022145 | ||||||||
| 00022146 | |||||||||
| 00022147 | |||||||||
| 00022148 | |||||||||
| 00022149 | |||||||||
| 00022150 | |||||||||
| 00125194 | |||||||||
| Ortholog (109) | |||||||||
| Paralog (74) | |||||||||
| Structured_description | Automated_description | Predicted to enable UDP-glycosyltransferase activity. Predicted to be located in membrane. Expressed in pharyngeal cell. Is an ortholog of several human genes including UGT2B10 (UDP glucuronosyltransferase family 2 member B10); UGT2B4 (UDP glucuronosyltransferase family 2 member B4); and UGT2B7 (UDP glucuronosyltransferase family 2 member B7). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T19H12.1a | |||||||
| T19H12.1b | |||||||||
| Corresponding_CDS_history | T19H12.1:wp177 | ||||||||
| Corresponding_transcript | T19H12.1a.1 | ||||||||
| T19H12.1b.1 | |||||||||
| Other_sequence | SS03189 | ||||||||
| Associated_feature | WBsf028070 | ||||||||
| WBsf028071 | |||||||||
| WBsf646782 | |||||||||
| WBsf231709 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00018863 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00035679 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00077703 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00053559 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr8250 | ||||||||
| Expr1038972 | |||||||||
| Expr1157122 | |||||||||
| Expr2017817 | |||||||||
| Expr2035954 | |||||||||
| Drives_construct | WBCnstr00013211 | ||||||||
| WBCnstr00025027 | |||||||||
| Construct_product | WBCnstr00025027 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (242) | |||||||||
| Interaction | WBInteraction000125078 | ||||||||
| WBInteraction000257431 | |||||||||
| WBInteraction000271086 | |||||||||
| WBInteraction000287680 | |||||||||
| WBInteraction000308774 | |||||||||
| WBInteraction000312807 | |||||||||
| WBInteraction000375826 | |||||||||
| WBInteraction000450455 | |||||||||
| WBInteraction000503715 | |||||||||
| Map_info | Map | V | Position | -3.74218 | Error | 0.003567 | |||
| Positive | Positive_clone | T19H12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00032062 | ||||||||
| WBPaper00033811 | |||||||||
| WBPaper00035663 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00051855 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00055433 | |||||||||
| WBPaper00057567 | |||||||||
| WBPaper00062515 | |||||||||
| WBPaper00062838 | |||||||||
| WBPaper00064073 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
