WormBase Tree Display for Gene: WBGene00020554
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| WBGene00020554 | SMap | S_parent | Sequence | T19A5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T19A5.3 | |||||||
| Molecular_name | T19A5.3a | ||||||||
| T19A5.3a.1 | |||||||||
| CE37678 | |||||||||
| T19A5.3b | |||||||||
| CE35773 | |||||||||
| T19A5.3b.1 | |||||||||
| Other_name | CELE_T19A5.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | T19A5.3 | ||||||||
| DB_info | Database | AceView | gene | 5J420 | |||||
| WormQTL | gene | WBGene00020554 | |||||||
| WormFlux | gene | WBGene00020554 | |||||||
| NDB | locus_tag | CELE_T19A5.3 | |||||||
| NCBI | gene | 179273 | |||||||
| RefSeq | protein | NM_001028971.5 | |||||||
| NM_001028972.5 | |||||||||
| TREEFAM | TREEFAM_ID | TF318239 | |||||||
| TrEMBL | UniProtAcc | Q22552 | |||||||
| H2L0A2 | |||||||||
| UniProt_GCRP | UniProtAcc | Q22552 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (65) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (30) | |||||||||
| Structured_description | Automated_description | Enriched in germline precursor cell; hypodermis; and interfacial epithelial cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; RNA-seq; and proteomic studies. Is affected by twenty-four chemicals including hydrogen sulfide; methylmercury hydroxide; and 1-methylnicotinamide based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T19A5.3a | |||||||
| T19A5.3b | |||||||||
| Corresponding_CDS_history | T19A5.3:wp93 | ||||||||
| T19A5.3a:wp132 | |||||||||
| Corresponding_transcript | T19A5.3a.1 | ||||||||
| T19A5.3b.1 | |||||||||
| Other_sequence (17) | |||||||||
| Associated_feature | WBsf652875 | ||||||||
| WBsf669193 | |||||||||
| WBsf669194 | |||||||||
| WBsf1000792 | |||||||||
| WBsf1000793 | |||||||||
| WBsf1000794 | |||||||||
| WBsf1020121 | |||||||||
| WBsf234158 | |||||||||
| WBsf234159 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00066813 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00053481 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035642 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1010546 | ||||||||
| Expr1038958 | |||||||||
| Expr1157046 | |||||||||
| Expr2006237 | |||||||||
| Expr2024455 | |||||||||
| Drives_construct | WBCnstr00025057 | ||||||||
| Construct_product | WBCnstr00025057 | ||||||||
| Microarray_results (30) | |||||||||
| Expression_cluster (240) | |||||||||
| Interaction (188) | |||||||||
| Map_info | Positive | Positive_clone | T19A5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 1.86525 | |||||||
| Reference | WBPaper00031852 | ||||||||
| Method | Gene |
