WormBase Tree Display for Gene: WBGene00020488
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| WBGene00020488 | SMap | S_parent | Sequence | T13G4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T13G4.1 | |||||||
| Molecular_name | T13G4.1 | ||||||||
| T13G4.1.1 | |||||||||
| CE21186 | |||||||||
| Other_name | T13G4.g | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_T13G4.1 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | T13G4.1 | ||||||||
| DB_info | Database | AceView | gene | XB811 | |||||
| WormQTL | gene | WBGene00020488 | |||||||
| WormFlux | gene | WBGene00020488 | |||||||
| NDB | locus_tag | CELE_T13G4.1 | |||||||
| NCBI | gene | 188482 | |||||||
| RefSeq | protein | NM_075823.1 | |||||||
| TrEMBL | UniProtAcc | Q966F5 | |||||||
| UniProt_GCRP | UniProtAcc | Q966F5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (12) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (19) | |||||||||
| Paralog | WBGene00185002 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Enriched in ABplpppapa and ABprpppapa based on single-cell RNA-seq studies. Is affected by several genes including eat-2; clk-1; and pgl-1 based on microarray and RNA-seq studies. Is affected by six chemicals including Psoralens; allantoin; and Sirolimus based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: GYF-like domain superfamily and GYF domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T13G4.1 | |||||||
| Corresponding_transcript | T13G4.1.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00018693 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00053284 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020950 | ||||||||
| Expr1156871 | |||||||||
| Expr2006159 | |||||||||
| Expr2024375 | |||||||||
| Drives_construct | WBCnstr00025102 | ||||||||
| Construct_product | WBCnstr00025102 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (32) | |||||||||
| Map_info | Positive | Positive_clone | T13G4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -18.4805 | |||||||
| Method | Gene |
