WormBase Tree Display for Gene: WBGene00020486
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| WBGene00020486 | SMap | S_parent | Sequence | CHROMOSOME_X | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T13C5.6 | |||||||
| Molecular_name | T13C5.6 | ||||||||
| T13C5.6.1 | |||||||||
| CE30454 | |||||||||
| Other_name | CELE_T13C5.6 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | T13C5.6 | ||||||||
| DB_info | Database | AceView | gene | XG820 | |||||
| WormQTL | gene | WBGene00020486 | |||||||
| WormFlux | gene | WBGene00020486 | |||||||
| NDB | locus_tag | CELE_T13C5.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020486|UniProtKB=Q22461 | |||||||
| family | PTHR14969 | ||||||||
| NCBI | gene | 180891 | |||||||
| RefSeq | protein | NM_076639.6 | |||||||
| TREEFAM | TREEFAM_ID | TF323272 | |||||||
| TrEMBL | UniProtAcc | Q22461 | |||||||
| UniProt_GCRP | UniProtAcc | Q22461 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (22) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00075297 | ||||||||
| 00075298 | |||||||||
| 00075299 | |||||||||
| 00075300 | |||||||||
| 00105690 | |||||||||
| Contained_in_operon | CEOPX072 | ||||||||
| Ortholog (33) | |||||||||
| Structured_description | Automated_description | Predicted to enable sphingosine-1-phosphate phosphatase activity. Acts upstream of or within IRE1-mediated unfolded protein response. Predicted to be located in membrane. Is an ortholog of human PLPP6 (phospholipid phosphatase 6) and PLPP7 (phospholipid phosphatase 7 (inactive)). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T13C5.6 | |||||||
| Corresponding_transcript | T13C5.6.1 | ||||||||
| Other_sequence | ASC38336_1 | ||||||||
| CJC06875_1 | |||||||||
| JI178802.1 | |||||||||
| JO472685.1 | |||||||||
| Associated_feature | WBsf654055 | ||||||||
| WBsf670611 | |||||||||
| WBsf982177 | |||||||||
| WBsf1005512 | |||||||||
| WBsf1005513 | |||||||||
| WBsf237453 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00035538 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00053263 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00018672 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1013372 | ||||||||
| Expr1156847 | |||||||||
| Expr2006151 | |||||||||
| Expr2024366 | |||||||||
| Drives_construct | WBCnstr00025104 | ||||||||
| Construct_product | WBCnstr00025104 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (114) | |||||||||
| Map_info | Positive | Positive_clone | T13C5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -3.41636 | |||||||
| Reference | WBPaper00028483 | ||||||||
| WBPaper00028985 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
