WormBase Tree Display for Gene: WBGene00020479
expand all nodes | collapse all nodes | view schema
| WBGene00020479 | SMap | S_parent | Sequence | T13C2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T13C2.3 | |||||||
| Molecular_name | T13C2.3b | ||||||||
| T13C2.3a | |||||||||
| CE39406 | |||||||||
| T13C2.3b.1 | |||||||||
| Other_name | CELE_T13C2.3 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | T13C2.3 | ||||||||
| DB_info | Database | AceView | gene | 2H81 | |||||
| WormQTL | gene | WBGene00020479 | |||||||
| WormFlux | gene | WBGene00020479 | |||||||
| NDB | locus_tag | CELE_T13C2.3 | |||||||
| NCBI | gene | 174117 | |||||||
| RefSeq | protein | NM_001027173.4 | |||||||
| NR_151571.1 | |||||||||
| TREEFAM | TREEFAM_ID | TF327198 | |||||||
| TrEMBL | UniProtAcc | Q7JP78 | |||||||
| UniProt_GCRP | UniProtAcc | Q7JP78 | |||||||
| RNAcentral | URSid | URS0000CBFF79 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (29) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (21) | |||||||||
| Structured_description | Automated_description | Enriched in GABAergic neurons; head mesodermal cell; male-specific anatomical entity; and muscle cell based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and hsf-1 based on microarray; tiling array; and RNA-seq studies. Is affected by fourteen chemicals including stavudine; Zidovudine; and Psoralens based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T13C2.3b | |||||||
| Corresponding_CDS_history | T13C2.3:wp86 | ||||||||
| T13C2.3:wp94 | |||||||||
| T13C2.3a:wp261 | |||||||||
| T13C2.3b:wp151 | |||||||||
| Corresponding_transcript | T13C2.3a | ||||||||
| T13C2.3b.1 | |||||||||
| Other_sequence | SSC05384_1 | ||||||||
| Oden_isotig21910 | |||||||||
| Dviv_isotig18706 | |||||||||
| CR07702 | |||||||||
| CJC16048_1 | |||||||||
| CRC03292_1 | |||||||||
| CRC07874_1 | |||||||||
| SS00709 | |||||||||
| CR04705 | |||||||||
| Associated_feature | WBsf654884 | ||||||||
| WBsf657165 | |||||||||
| WBsf657716 | |||||||||
| WBsf988249 | |||||||||
| WBsf1012424 | |||||||||
| WBsf221512 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00035535 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00018667 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00053255 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022478 | ||||||||
| Expr1038928 | |||||||||
| Expr1156837 | |||||||||
| Expr2006145 | |||||||||
| Expr2024360 | |||||||||
| Drives_construct | WBCnstr00025111 | ||||||||
| Construct_product | WBCnstr00025111 | ||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (147) | |||||||||
| Interaction (27) | |||||||||
| Map_info | Positive | Positive_clone | T13C2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 0.109672 | |||||||
| Method | Gene |
