WormBase Tree Display for Gene: WBGene00020472

WBGene00020472 SMap: S_parent: Sequence: T13B5
  Identity: Version: 2
    Name: CGC_name: lips-11 Person_evidence: WBPerson261
      Sequence_name: T13B5.5
      Molecular_name: T13B5.5
        T13B5.5.1
        CE13611
      Other_name: CELE_T13B5.5 Accession_evidence: NDB BX284602
      Public_name: lips-11
    DB_info: Database: AceView gene 2B398
        WormQTL gene WBGene00020472
        WormFlux gene WBGene00020472
        NDB locus_tag CELE_T13B5.5
        Panther gene CAEEL|WormBase=WBGene00020472|UniProtKB=O17375
          family PTHR32015
        NCBI gene 188467
        RefSeq protein NM_061513.2
        TREEFAM TREEFAM_ID TF316108
        TrEMBL UniProtAcc O17375
        UniProt_GCRP UniProtAcc O17375
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:03 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 20 Dec 2007 11:31:35 WBPerson2970 Name_change: CGC_name: lips-11
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lips
    Allele (106)
    Strain: WBStrain00049424
    RNASeq_FPKM (74)
    GO_annotation: 00029662
      00029663
      00105684
      00125100
      00125101
    Ortholog: WBGene00191465 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00162263 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00066325 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00066324 Caenorhabditis remanei From_analysis: TreeFam
      Pan_g9102 Panagrellus redivivus From_analysis: WormBase-Compara
      chrII_pilon.g3298 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00265805 Strongyloides ratti From_analysis: WormBase-Compara
    Paralog (17)
    Structured_description: Automated_description: Predicted to enable lipase activity. Involved in IRE1-mediated unfolded protein response. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T13B5.5
    Corresponding_transcript: T13B5.5.1
    Other_sequence: MCC01378_1
      MJC01108_1
      MJ00684
      GW406727.1
      PSC00299_2
    Associated_feature: WBsf222666
  Experimental_info: RNAi_result: WBRNAi00053248 Inferred_automatically: RNAi_primary
      WBRNAi00035532 Inferred_automatically: RNAi_primary
      WBRNAi00095727 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1018156
      Expr1156831
      Expr2013212
      Expr2031444
    Microarray_results (15)
    Expression_cluster: WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
      WBPaper00037950:bodywall-muscle_L1-larva_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:hypodermis_L1-larva_expressed
      WBPaper00037950:intestine_CoreEnriched
      WBPaper00037950:intestine_embryo_enriched
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:intestine_larva_enriched
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00044557:DietaryRestriction_downregulated
      WBPaper00045774:clk-1_downregulated
      WBPaper00045774:clk-1_downregulated_CoQ10_independent
      WBPaper00048810:CoQ-deficiency_downregulated
      WBPaper00049018:swsn-2.2(RNAi)_downregulated
      WBPaper00049266:trx-1(ok1449)_regulated_oxidative-stressed
      WBPaper00049266:trx-1(ok1449)_regulated_unstressed
      WBPaper00049377:MWCNT_downregulated
      WBPaper00050193:cec-4(ok3124)_upregulated_L1
      WBPaper00050370:dpy-21(e428)_L3_upregulated
      WBPaper00050370:mys-1(RNAi)_L3_upregulated
      WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
      WBPaper00050488:20C_vs_25C_regulated_N2_adult
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
      WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050561:indole_10-fold_upregulated
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00050928:male-mating_downregulated
      WBPaper00051540:exc-7(csb29);mbl-1(csb30)_upregulated
      WBPaper00051558:aging_regulated
      WBPaper00052856:Cadmium_regulated
      WBPaper00053295:lin-22(ot269)_upregulated
      WBPaper00053318:Aging_upregulated_mRNA_N2
      WBPaper00053388:dauer_regulated_Cluster4
      WBPaper00053599:female_vs_male_downregulated
      WBPaper00053606:elt-2(ca15)_vs_elt-2(ca15);elt-7(tm840)_doenregulated
      WBPaper00053606:N2_vs_elt-2(ca15)_upregulated
      WBPaper00053771:down_by_skn-1(RNAi)_at_dpy-7(e88)
      WBPaper00053771:up_at_24h-NaCl
      WBPaper00053771:up_at_dpy-7(e88)
      WBPaper00053888:drh-3(rrr2)_upregulated
      WBPaper00054493:hpl-2(tm1489)_downregulated
      WBPaper00054758:alg-1(gk204)_upregulated
      WBPaper00055226:adr-1(tm668)_downregulated
      WBPaper00055354:Allantoin_upregulated
      WBPaper00055354:Rapamycin-Psora_upregulated
      WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
      WBPaper00055354:Rifampicin_downregulated
      WBPaper00055944:C.butyricum_vs_OP50_downregulated
      WBPaper00056161:male_enriched_siRNA
      WBPaper00056167:ifo-1(kc2)_upregulated
      WBPaper00056169:rrf-3(pk1426)_upregulated_L2
      WBPaper00056169:rrf-3(pk1426)_upregulated_L3
      WBPaper00056284:ints-5(RNAi)_upregulated
      WBPaper00056443:sek-1(km4)_upregulated
      WBPaper00056731:human-amylin_upregulated
      WBPaper00056809:smn-1(ok355)_upregulated
      WBPaper00057068:Cadmium_upregulated
      WBPaper00057068:ints-4(RNAi)_downregulated_Cadmium
      WBPaper00058598:mex-1(or286)_upregulated
      WBPaper00058711:paraquat_downregulated
      WBPaper00058711:wdr-5(ok1417)_upregulated
      WBPaper00058725:sftb-1(cer6)_upregulated
      WBPaper00059566:wdr-23(mac32)_upregulated
      WBPaper00059895:wounding_upregulated
      WBPaper00060434:pH4.33_vs_pH6.33_uprgulated
      WBPaper00060661:hypoxia_downregulated
      WBPaper00060661:sensory-neuron_depleted
      WBPaper00060703:nas-38(ok3407)_upregulated
      WBPaper00060764:swsn-9(ok1354)_upregulated
      WBPaper00060811:L1_vs_adult_downregulated_neural
      WBPaper00061007:S.aquatilis_upregulated
      WBPaper00061081:skpo-1(ok1640)_upregulated_OG1RF
      WBPaper00061081:skpo-1(ok1640)_upregulated_OP50
      WBPaper00061341:28C_24h_upregulated
      WBPaper00061341:28C_48h_upregulated
      WBPaper00061357:mett-10(ok2204)_upregulated_OP50
      WBPaper00061405:S.aureus_downregulated_starvation
      WBPaper00061527:C17H12.6-swt-6
      WBPaper00061530:nhr-49(e2144)_upregulated
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062335:sir-2.1(ok434)_upregulated_L3
      WBPaper00062456:doxycycline_upregulated_CB4856_transcript
      WBPaper00062456:doxycycline_upregulated_N2_transcript
      WBPaper00062590:Aging_upregulated_intestine
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
      WBPaper00064107:lin-35(n745)_upregulated
      WBPaper00064107:lin-52(3A)_vs_lin-52(WT)_upregulated
      WBPaper00064721:fasn-1(g14)_downregulated_starved
      WBPaper00065005:sams-4(RNAi)_upregulated
      WBPaper00065096:Day10_vs_Day1_upregulated
      WBPaper00065096:npr-8(ok1439)_upregulated_Day10_20C
      WBPaper00065096:npr-8(ok1439)_upregulated_Day10_25C
      WBPaper00065149:lin-52(n771)_upregulated
      WBPaper00065288:mdt-15(tm2182)_upregulated
      WBPaper00065581:hpk-1(pk1393)_upregulated
      WBPaper00065749:endu-2(tm4977)_upregulated
      WBPaper00065749:Heat-Shock-With-Recovery_upregulated_N2
      WBPaper00065759:dot-1.1(knu339)_upregulated
      WBPaper00065926:pgph-2(overepxreesion)_upregulated
      WBPaper00065926:pgph-2(overepxreesion)_upregulated_glucose
      WBPaper00065995:M.humicola-extract_upregulated_old-1(ok1273)
      WBPaper00066110:tetraploid_vs_diploid_upregulated
      WBPaper00066232:hsf-1(RNAi)_upregulated_ash-2
      WBPaper00066232:hsf-1(RNAi)_upregulated_WT
      cgc4489_group_17
      WBPaper00026929:Resveratrol_regulated_daf-16
      WBPaper00029437:dcr-1_upregulated
      WBPaper00031532:Larva_Pan_Neuronal_Depleted
      WBPaper00036123:Cadmium_regulated
      WBPaper00036286:Pattern_H
      WBPaper00037113:Diazinon_16C_regulated
      WBPaper00040876:mir-35_upregulated
      WBPaper00041211:RPW-24_Up
      WBPaper00041906:I-3690_vs_OP50_10d
      WBPaper00041906:I-4317_vs_OP50_10d
      WBPaper00041939:control_vs_EtBr-exposed_51h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
      WBPaper00041939:control_vs_UVC-exposed_51h
      WBPaper00042128:gei-8(ok1671)_downregulated
      WBPaper00044535:male_downregulated
      WBPaper00046083:ogt-1(ok1474)_OP50_upregulated
      WBPaper00046548:dafachronic-acid_downregulated
      WBPaper00047070:N2_UV_upregulated
      WBPaper00047070:xpa-1_UV_upregulated
      WBPaper00048567:dnj-14_upregulated
      WBPaper00050767:Octopamine_induced
      WBPaper00055899:nitroguanidine_regulated
      [cgc6390]:male_soma-enriched
    Interaction (13)
  Map_info: Map: II Position: -15.5679
    Positive: Positive_clone: T13B5 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00026830
    WBPaper00042257
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene