WormBase Tree Display for Gene: WBGene00020457

WBGene00020457 SMap: S_parent: Sequence: T12B5
  Identity: Version: 2
    Name: CGC_name: fbxa-67 Person_evidence: WBPerson655
      Sequence_name: T12B5.11
      Molecular_name: T12B5.11
        T12B5.11.1
        CE20068
      Other_name: CELE_T12B5.11 Accession_evidence: NDB BX284603
      Public_name: fbxa-67
    DB_info: Database: AceView gene 3B568
        WormQTL gene WBGene00020457
        WormFlux gene WBGene00020457
        NDB locus_tag CELE_T12B5.11
        Panther gene CAEEL|WormBase=WBGene00020457|UniProtKB=Q9TZ24
          family PTHR23015
        NCBI gene 175258
        RefSeq protein NM_064901.6
        TREEFAM TREEFAM_ID TF322006
        TrEMBL UniProtAcc Q9TZ24
        UniProt_GCRP UniProtAcc Q9TZ24
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:03 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 12 Dec 2005 15:18:56 WBPerson2970 Name_change: CGC_name: fbxa-67
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxa
    Allele: WBVar01548347
      WBVar02100171
      WBVar02100172
      WBVar02122810
      WBVar02124101
      WBVar02121158
      WBVar02120976
      WBVar02122453
      WBVar01500082
      WBVar02120984
      WBVar02123377
      WBVar01577877
      WBVar02099460
      WBVar02099461
      WBVar01606501
      WBVar01606502
      WBVar01606503
      WBVar01606504
      WBVar01606505
      WBVar01606506
      WBVar01606507
      WBVar02123578
      WBVar01540550
      WBVar01606508
      WBVar01499552
      WBVar01606509
      WBVar01606510
      WBVar02124686
      WBVar01606511
      WBVar02121742
      WBVar01606512
      WBVar01606513
      WBVar02101316
      WBVar01606514
      WBVar02123217
      WBVar02101317
      WBVar02122116
      WBVar01785057
      WBVar01785058
      WBVar00388963
      WBVar00388964
      WBVar01785059
      WBVar01785060
      WBVar00388965
      WBVar02120832
      WBVar00388966
      WBVar01785061
      WBVar00388967
      WBVar01498832
      WBVar00388968
      WBVar00388969
      WBVar00388970
      WBVar00095530
      WBVar00095531
      WBVar02120474
      WBVar00095532
      WBVar00095533
      WBVar00095534
      WBVar00095535
      WBVar02124343
      WBVar02121583
      WBVar00800473
      WBVar02111281
      WBVar00800474
      WBVar02120666
      WBVar02121404
      WBVar00800475
      WBVar00800476
      WBVar00800477
      WBVar00800478
      WBVar00800479
      WBVar00800480
      WBVar00800481
      WBVar00800482
      WBVar00800483
      WBVar00800484
      WBVar00800485
      WBVar00800486
      WBVar00800487
      WBVar00800488
      WBVar00800489
      WBVar00800490
      WBVar01802286
      WBVar00800491
      WBVar01802287
      WBVar00800492
      WBVar02124181
      WBVar01802288
      WBVar02121974
      WBVar00800493
      WBVar01802289
      WBVar02092356
      WBVar02092357
      WBVar00033063
      WBVar01692160
      WBVar00232942
      WBVar01692161
      WBVar01692162
      WBVar00033068
      WBVar00033073
      WBVar02122375
      WBVar02122559
      WBVar02124401
      WBVar01643327
      WBVar01643328
      WBVar02124954
      WBVar01643329
      WBVar02122933
      WBVar01506287
      WBVar01506288
      WBVar02123672
      WBVar01506289
      WBVar01506290
      WBVar01506291
      WBVar02124779
      WBVar01685934
      WBVar00091206
      WBVar01685935
      WBVar01685936
      WBVar01322897
      WBVar01667127
      WBVar01322898
      WBVar01322900
      WBVar01667128
      WBVar02014586
      WBVar01322901
      WBVar01255567
      WBVar01255568
      WBVar01769489
      WBVar01255569
      WBVar01769490
      WBVar01769491
      WBVar01700510
      WBVar01769492
      WBVar01700511
      WBVar01700512
      WBVar01700513
      WBVar01700514
      WBVar01700515
      WBVar01700516
      WBVar01700517
      WBVar02121865
      WBVar01706443
      WBVar01706444
      WBVar02111564
      WBVar01706445
      WBVar02111565
      WBVar01706446
      WBVar01706447
      WBVar02123898
      WBVar01479084
      WBVar01479085
      WBVar02106790
    RNASeq_FPKM (74)
    Ortholog (18)
    Paralog (225)
    Structured_description: Concise_description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. Paper_evidence: WBPaper00012854
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enriched in several structures, including ABplapaaapa; ABplppppaa; ABprapaaapa; ABprppppaa; and neurons based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and dpy-10 based on microarray and RNA-seq studies. Is affected by twelve chemicals including bisphenol A; allantoin; and Sirolimus based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; FTH domain; and F-box A protein FB224. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T12B5.11
    Corresponding_transcript: T12B5.11.1
    Associated_feature: WBsf650831
      WBsf226166
      WBsf226167
  Experimental_info: RNAi_result (11)
    Expr_pattern: Expr1025504
      Expr1156774
      Expr2011568
      Expr2029806
    Drives_construct: WBCnstr00025123
    Construct_product: WBCnstr00025123
    Microarray_results: SMD_T12B5.11
      SMD_T12B5.13
      172589_x_at
      186445_at
      A_12_P107032
      Aff_T12B5.11
      Aff_T12B5.13
      GPL13394_WBGene00020457
      GPL13914_T12B5.11
      GPL14144_T12B5.11_357-416_0.408_172_A
      GPL19516_CGZ0034807
      GPL19516_CGZ0034809
      GPL21109_T12B5.11
      GPL21109_T12B5.13
      GPL3518_CE20068
      GPL8304_CE_WBGene00020457_A
      GPL8673_T12B5_11P00021
      GPL8673_T12B5_11P00228
      GPL8673_T12B5_11P00549
      GPL8673_T12B5_13P00175
      GPL9450_T12B5.11
      cea2.p.73258
    Expression_cluster (169)
    Interaction: WBInteraction000291995
      WBInteraction000306350
      WBInteraction000318032
      WBInteraction000324010
      WBInteraction000357468
      WBInteraction000380177
  Map_info: Map: III Position: -25.0047 Error: 0.011088
    Positive: Positive_clone: T12B5 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00012854
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene