WormBase Tree Display for Gene: WBGene00020456
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WBGene00020456 | SMap | S_parent | Sequence | T12B5 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | fbxa | ||||||
Allele (123) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00097796 | ||||||
00105824 | |||||||
Ortholog (29) | |||||||
Paralog (222) | |||||||
Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. | Paper_evidence | WBPaper00012854 | |||
Curator_confirmed | WBPerson567 | ||||||
Date_last_updated | 17 Jun 2001 00:00:00 | ||||||
Automated_description | Involved in innate immune response. Acts upstream of or within PERK-mediated unfolded protein response. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | T12B5.10 | |||||
Corresponding_transcript | T12B5.10.1 | ||||||
Associated_feature | WBsf650830 | ||||||
WBsf226162 | |||||||
WBsf226163 | |||||||
WBsf226164 | |||||||
Experimental_info | RNAi_result | WBRNAi00018634 | Inferred_automatically | RNAi_primary | |||
WBRNAi00053179 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00006629 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00018627 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00035500 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern (3) | |||||||
Drives_construct | WBCnstr00025124 | ||||||
Construct_product | WBCnstr00025124 | ||||||
Microarray_results (18) | |||||||
Expression_cluster (235) | |||||||
Interaction (175) | |||||||
Map_info | Map | III | Position | -25.0533 | Error | 0.006586 | |
Positive | Positive_clone | T12B5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00012854 | ||||||
WBPaper00065331 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |