WormBase Tree Display for Gene: WBGene00020441
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| WBGene00020441 | SMap | S_parent | Sequence | T12A2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | bcas-2 | |||||||
| Sequence_name | T12A2.7 | ||||||||
| Molecular_name | T12A2.7 | ||||||||
| T12A2.7.1 | |||||||||
| CE30396 | |||||||||
| Other_name | CELE_T12A2.7 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | bcas-2 | ||||||||
| DB_info | Database | AceView | gene | 3H334 | |||||
| WormQTL | gene | WBGene00020441 | |||||||
| WormFlux | gene | WBGene00020441 | |||||||
| NDB | locus_tag | CELE_T12A2.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020441|UniProtKB=Q22417 | |||||||
| family | PTHR13296 | ||||||||
| NCBI | gene | 188435 | |||||||
| RefSeq | protein | NM_065959.8 | |||||||
| TREEFAM | TREEFAM_ID | TF105818 | |||||||
| TrEMBL | UniProtAcc | Q22417 | |||||||
| UniProt_GCRP | UniProtAcc | Q22417 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 05 Apr 2017 11:17:23 | WBPerson2970 | Name_change | CGC_name | bcas-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | bcas | ||||||||
| Allele (12) | |||||||||
| Strain | WBStrain00047483 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00075190 | ||||||||
| 00075191 | |||||||||
| 00075192 | |||||||||
| 00075193 | |||||||||
| 00075194 | |||||||||
| 00125076 | |||||||||
| Contained_in_operon | CEOP3360 | ||||||||
| Ortholog (32) | |||||||||
| Paralog | WBGene00020439 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00020440 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Predicted to be involved in RNA splicing and mRNA processing. Predicted to be located in nucleus. Predicted to be part of Prp19 complex and catalytic step 2 spliceosome. Human ortholog(s) of this gene implicated in breast cancer. Is an ortholog of human BCAS2 (BCAS2 pre-mRNA processing factor). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:1612 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:975) | ||||
| Molecular_info | Corresponding_CDS | T12A2.7 | |||||||
| Corresponding_transcript | T12A2.7.1 | ||||||||
| Other_sequence (44) | |||||||||
| Associated_feature | WBsf226789 | ||||||||
| WBsf226790 | |||||||||
| Experimental_info | RNAi_result (23) | ||||||||
| Expr_pattern | Expr1013554 | ||||||||
| Expr1038916 | |||||||||
| Expr1156756 | |||||||||
| Expr2009578 | |||||||||
| Expr2027815 | |||||||||
| Drives_construct | WBCnstr00025139 | ||||||||
| Construct_product | WBCnstr00025139 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (79) | |||||||||
| Interaction (11) | |||||||||
| Map_info | Positive | Positive_clone | T12A2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -1.40797 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
