WormBase Tree Display for Gene: WBGene00020422

WBGene00020422 SMap: S_parent: Sequence: T10F2
  Identity: Version: 1
    Name: Sequence_name: T10F2.2
      Molecular_name: T10F2.2
        T10F2.2.1
        CE02041
      Other_name: CELE_T10F2.2 Accession_evidence: NDB BX284603
      Public_name: T10F2.2
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:03 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (11)
    Strain: WBStrain00006132
      WBStrain00002014
      WBStrain00002140
    RNASeq_FPKM (74)
    GO_annotation: 00056062
      00056063
      00056064
      00056065
      00056066
      00056067
    Contained_in_operon: CEOP3260
    Ortholog: WBGene00040131 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00068833 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00141404 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00209935 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00225975 Brugia malayi From_analysis: WormBase-Compara
      CSP21.g5813 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g110 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g19777 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g3721 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g7164 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g5102 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g8190 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g3218 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g16873 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00148.g5618 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-T10F2.2 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g12524 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_05853.g35688 Caenorhabditis sinica From_analysis: WormBase-Compara
      GCK72_008522 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g08169 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g22587 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_30025900 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g7652 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00245769 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00261347 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00287959 Trichuris muris From_analysis: WormBase-Compara
      WBGene00290750 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000005656 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            OMA
            OrthoInspector
            Panther
      FB:FBgn0030218 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-060526-35 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-070112-1072 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:10985 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:22921 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1342274 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:2137907 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1310667 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1311488 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Paralog (35)
    Structured_description: Concise_description: T10F2.2 is orthologous to the human gene SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER; ORNITHINE TRANSPORTER) MEMBER 15 (SLC25A15; OMIM:603861), which when mutated leads to disease. Curator_confirmed: WBPerson1823
            WBPerson567
          Date_last_updated: 06 Aug 2004 00:00:00
      Automated_description: Predicted to enable L-ornithine transmembrane transporter activity. Predicted to be involved in mitochondrial L-ornithine transmembrane transport. Predicted to be located in mitochondrion. Expressed in tail. Human ortholog(s) of this gene implicated in citrullinemia and ornithine translocase deficiency. Is an ortholog of human SLC25A15 (solute carrier family 25 member 15) and SLC25A2 (solute carrier family 25 member 2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0050720 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:10985)
      DOID:9252 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:10985)
      DOID:9273 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:10985)
  Molecular_info: Corresponding_CDS: T10F2.2
    Corresponding_transcript: T10F2.2.1
    Other_sequence (27)
    Associated_feature: WBsf226643
  Experimental_info: RNAi_result: WBRNAi00018552 Inferred_automatically: RNAi_primary
      WBRNAi00053061 Inferred_automatically: RNAi_primary
      WBRNAi00005235 Inferred_automatically: RNAi_primary
      WBRNAi00035448 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram848
      Expr6662
      Expr6663
      Expr6664
      Expr1023116
      Expr1038906
      Expr1156668
      Expr2006087
      Expr2024301
    Drives_construct: WBCnstr00001929
      WBCnstr00002797
      WBCnstr00004420
      WBCnstr00025153
    Construct_product: WBCnstr00025153
    Microarray_results (19)
    Expression_cluster (110)
    Interaction (16)
  Map_info: Positive: Positive_clone: T10F2 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: III -2.04523
  Reference: WBPaper00038491
    WBPaper00055090
  Method: Gene