WormBase Tree Display for Gene: WBGene00020275
expand all nodes | collapse all nodes | view schema
| WBGene00020275 | SMap | S_parent | Sequence | T05H4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | atp-4 | Person_evidence | WBPerson1157 | |||||
| Sequence_name | T05H4.12 | ||||||||
| Molecular_name | T05H4.12 | ||||||||
| T05H4.12.1 | |||||||||
| CE13291 | |||||||||
| T05H4.12.2 | |||||||||
| Other_name | CELE_T05H4.12 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | atp-4 | ||||||||
| DB_info | Database | AceView | gene | 5G906 | |||||
| WormQTL | gene | WBGene00020275 | |||||||
| WormFlux | gene | WBGene00020275 | |||||||
| NDB | locus_tag | CELE_T05H4.12 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020275|UniProtKB=O16517 | |||||||
| family | PTHR12441 | ||||||||
| NCBI | gene | 179025 | |||||||
| RefSeq | protein | NM_001392530.1 | |||||||
| TrEMBL | UniProtAcc | O16517 | |||||||
| UniProt_GCRP | UniProtAcc | O16517 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 31 Aug 2005 14:07:05 | WBPerson2970 | Name_change | CGC_name | atp-4 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | atp | ||||||||
| Allele (36) | |||||||||
| Strain | WBStrain00037564 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Contained_in_operon | CEOP5108 | ||||||||
| Ortholog (31) | |||||||||
| Structured_description | Automated_description | Predicted to enable proton transmembrane transporter activity. Predicted to be involved in proton motive force-driven ATP synthesis and proton transmembrane transport. Predicted to be located in mitochondrial inner membrane. Predicted to be part of mitochondrial proton-transporting ATP synthase complex. Human ortholog(s) of this gene implicated in essential hypertension. Is an ortholog of human ATP5PF (ATP synthase peripheral stalk subunit F6). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:10825 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:847) | ||||
| Molecular_info | Corresponding_CDS | T05H4.12 | |||||||
| Corresponding_transcript | T05H4.12.1 | ||||||||
| T05H4.12.2 | |||||||||
| Other_sequence (54) | |||||||||
| Associated_feature | WBsf652701 | ||||||||
| WBsf652702 | |||||||||
| WBsf233795 | |||||||||
| WBsf233796 | |||||||||
| WBsf233797 | |||||||||
| Experimental_info | RNAi_result (35) | ||||||||
| Expr_pattern | Expr1025885 | ||||||||
| Expr1038829 | |||||||||
| Expr1156199 | |||||||||
| Expr2009512 | |||||||||
| Expr2027749 | |||||||||
| Drives_construct | WBCnstr00025246 | ||||||||
| Construct_product | WBCnstr00025246 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (100) | |||||||||
| Interaction (49) | |||||||||
| Map_info | Map | V | Position | -0.179117 | Error | 0.000718 | |||
| Positive | Positive_clone | T05H4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00026715 | ||||||||
| WBPaper00049531 | |||||||||
| WBPaper00061870 | |||||||||
| WBPaper00062370 | |||||||||
| WBPaper00065341 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
