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WormBase Tree Display for Gene: WBGene00020269

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Name Class

WBGene00020269SMapS_parentSequenceT05H4
IdentityVersion3
NameCGC_nameerfa-1Person_evidenceWBPerson124
Sequence_nameT05H4.6
Molecular_nameT05H4.6a
T05H4.6a.1
CE52351
T05H4.6b
CE13279
T05H4.6b.1
T05H4.6b.2
Other_namephi-21Person_evidenceWBPerson2582
etf-1Person_evidenceWBPerson261
CELE_T05H4.6Accession_evidenceNDBBX284605
Public_nameerfa-1
DB_infoDatabaseAceViewgene5G915
WormQTLgeneWBGene00020269
WormFluxgeneWBGene00020269
NDBlocus_tagCELE_T05H4.6
PanthergeneCAEEL|WormBase=WBGene00020269|UniProtKB=O16520
familyPTHR10113
NCBIgene179028
RefSeqproteinNM_001356664.2
NM_001392531.1
SwissProtUniProtAccO16520
UniProt_GCRPUniProtAccO16520
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:02WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
230 Sep 2011 16:40:15WBPerson2970Name_changeCGC_nameetf-1
311 Nov 2013 09:06:04WBPerson2970Name_changeCGC_nameerfa-1
Other_nameetf-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classerfa
Allele (29)
StrainWBStrain00047473
RNASeq_FPKM (74)
GO_annotation00028225
00028226
00028227
00028228
00028229
00028230
00028231
00028232
00124940
00124941
Contained_in_operonCEOP5112
OrthologWBGene00038233Caenorhabditis briggsaeFrom_analysisOrthoMCL
WormBase-Compara
WBGene00140470Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00234015Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g469Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g1298Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g13243Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g8755Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g5522Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g11241Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g14893Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g12797Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g12799Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g13619Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g1568Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g2272Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g25824Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g11753Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00648.g13136Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_09095.g21877Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_16199.g25299Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_V.g19842Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_V.g19844Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g17538Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00013.g837Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_10780Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_017924Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g05066Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g4777Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_50212400Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_50212900Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrV_pilon.g14434Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00123920Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00052156Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00243046Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00243050Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00243054Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00101327Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00102577Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00255899Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00292699Trichuris murisFrom_analysisWormBase-Compara
SGD:S000000347Saccharomyces cerevisiaeFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
FB:FBgn0036974Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-021029-1Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-080218-14Danio rerioFrom_analysisEnsEMBL-Compara
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:3477Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:2385071Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:1305712Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
Structured_descriptionAutomated_descriptionPredicted to enable sequence-specific mRNA binding activity and translation release factor activity, codon specific. Predicted to be involved in cytoplasmic translational termination. Predicted to be located in cytosol. Predicted to be part of translation release factor complex. Is an ortholog of human ETF1 (eukaryotic translation termination factor 1).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDST05H4.6a
T05H4.6b
Corresponding_CDS_historyT05H4.6:wp202
T05H4.6a:wp142
T05H4.6a:wp261
T05H4.6b:wp142
Corresponding_transcriptT05H4.6a.1
T05H4.6b.1
T05H4.6b.2
Other_sequence (95)
Associated_featureWBsf646878
WBsf655096
WBsf1019802
WBsf231875
WBsf231876
WBsf231877
WBsf231878
Experimental_infoRNAi_result (14)
Expr_patternExpr1010817
Expr1038825
Expr1156207
Expr2011356
Expr2029592
Drives_constructWBCnstr00025250
Construct_productWBCnstr00025250
Microarray_results (26)
Expression_cluster (153)
Interaction (281)
Map_infoMapVPosition-0.173758Error0.001676
PositivePositive_cloneT05H4Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00033090
WBPaper00035228
WBPaper00038491
WBPaper00046427
WBPaper00049828
WBPaper00055090
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene