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WormBase Tree Display for Gene: WBGene00020259

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Name Class

WBGene00020259SMapS_parentSequenceT05E7
IdentityVersion1
NameSequence_nameT05E7.3
Molecular_nameT05E7.3
T05E7.3.1
CE13235
Other_nameCELE_T05E7.3Accession_evidenceNDBBX284601
Public_nameT05E7.3
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:02WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (46)
StrainWBStrain00055210
RNASeq_FPKM (74)
GO_annotation00025990
00025991
00025992
00025993
00025994
00025995
00124934
Contained_in_operonCEOP1308
OrthologWBGene00033486Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00064283Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00138610Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00101958Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00149610Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00225842Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g9044Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g725Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g6212Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g6214Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g17172Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g17174Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g17177Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g2002Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g2005Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g5528Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g14965Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g3695Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g17716Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g1083Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g24822Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g25335Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g27443Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g28300Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g6125Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g6127Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00196.g6748Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_I.g2379Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_I.g2381Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp5_scaffold_00952.g17027Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00952.g17029Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_06997Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_002694Caenorhabditis remaneiFrom_analysisWormBase-Compara
Pan_g9861Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_10318600Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrI_pilon.g1093Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00217361Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00086146Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00238196Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00292755Trichuris murisFrom_analysisWormBase-Compara
FB:FBgn0036571Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
ZFIN:ZDB-GENE-040426-838Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:28984Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:2146110Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
RGD:1564420Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
Structured_descriptionAutomated_descriptionPredicted to be involved in organelle organization and regulation of actin nucleation. Predicted to be located in endosome. Predicted to be part of WASH complex. Human ortholog(s) of this gene implicated in Ritscher-Schinzel syndrome 1 and hereditary spastic paraplegia 8. Is an ortholog of human WASHC5 (WASH complex subunit 5).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:0110823Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:28984)
DOID:0060571Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:28984)
Molecular_infoCorresponding_CDST05E7.3
Corresponding_transcriptT05E7.3.1
Other_sequenceCBC00338_1
Associated_featureWBsf656370
WBsf217767
WBsf217768
Experimental_infoRNAi_resultWBRNAi00000590Inferred_automaticallyRNAi_primary
WBRNAi00117090Inferred_automaticallyRNAi_primary
WBRNAi00052527Inferred_automaticallyRNAi_primary
WBRNAi00004131Inferred_automaticallyRNAi_primary
WBRNAi00035212Inferred_automaticallyRNAi_primary
Expr_patternExpr1026684
Expr1038818
Expr1156152
Expr2005887
Expr2024103
Drives_constructWBCnstr00025260
Construct_productWBCnstr00025260
Microarray_results (20)
Expression_cluster (101)
InteractionWBInteraction000166650
WBInteraction000232703
WBInteraction000332689
WBInteraction000432183
Map_infoPositivePositive_cloneT05E7Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionI0.877086
ReferenceWBPaper00038491
WBPaper00055090
WBPaper00064339
WBPaper00064370
MethodGene