WormBase Tree Display for Gene: WBGene00020250

WBGene00020250 SMap: S_parent: Sequence: T05C1
  Identity: Version: 1
    Name: Sequence_name: T05C1.3
      Molecular_name: T05C1.3
        T05C1.3.1
        CE02861
      Other_name: CELE_T05C1.3 Accession_evidence: NDB BX284602
      Public_name: T05C1.3
    DB_info: Database: AceView gene 2E776
        WormQTL gene WBGene00020250
        WormFlux gene WBGene00020250
        NDB locus_tag CELE_T05C1.3
        NCBI gene 188114
        RefSeq protein NM_062392.2
        TREEFAM TREEFAM_ID TF321478
        TrEMBL UniProtAcc Q22219
        UniProt_GCRP UniProtAcc Q22219
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:02 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (32)
    RNASeq_FPKM (74)
    Ortholog: WBGene00034236 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00065117 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00130725 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00225834 Brugia malayi From_analysis: WormBase-Compara
      CSP21.g9330 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g7863 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g363 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g12709 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g27472 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g15658 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g19812 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g6967 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g10145 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00006.g507 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-T05C1.3 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp5_scaffold_02444.g26509 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_06740 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_004492 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_20231010 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrII_pilon.g4254 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00247569 Onchocerca volvulus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in several structures, including NSM; PLM; amphid sheath cell; germline precursor cell; and tail hypodermis based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and rrf-3 based on tiling array; RNA-seq; and microarray studies. Is affected by sixteen chemicals including methylmercury hydroxide; 1-methylnicotinamide; and manganese chloride based on RNA-seq and microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T05C1.3
    Corresponding_transcript: T05C1.3.1
    Other_sequence: HBC13084_1
      FG979651.1
      Oden_isotig22139
      MC01232
    Associated_feature: WBsf979059
      WBsf222921
      WBsf222922
  Experimental_info: RNAi_result: WBRNAi00052483 Inferred_automatically: RNAi_primary
      WBRNAi00035187 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1012901
      Expr1156108
      Expr2005865
      Expr2024082
    Drives_construct: WBCnstr00025266
    Construct_product: WBCnstr00025266
    Microarray_results (18)
    Expression_cluster (161)
    Interaction (45)
  Map_info: Positive: Positive_clone: T05C1 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II -4.32366
  Method: Gene