WormBase Tree Display for Gene: WBGene00020248
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| WBGene00020248 | SMap | S_parent | Sequence | T05C1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T05C1.1 | |||||||
| Molecular_name | T05C1.1 | ||||||||
| T05C1.1.1 | |||||||||
| CE02859 | |||||||||
| Other_name | CELE_T05C1.1 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | T05C1.1 | ||||||||
| DB_info | Database | AceView | gene | 2E769 | |||||
| WormQTL | gene | WBGene00020248 | |||||||
| WormFlux | gene | WBGene00020248 | |||||||
| NDB | locus_tag | CELE_T05C1.1 | |||||||
| NCBI | gene | 188112 | |||||||
| RefSeq | protein | NM_062390.3 | |||||||
| TrEMBL | UniProtAcc | Q22217 | |||||||
| UniProt_GCRP | UniProtAcc | Q22217 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele | WBVar01559389 | ||||||||
| WBVar01499702 | |||||||||
| WBVar00303083 | |||||||||
| WBVar00303084 | |||||||||
| WBVar00303085 | |||||||||
| WBVar01371566 | |||||||||
| WBVar01719559 | |||||||||
| WBVar01498435 | |||||||||
| WBVar01934578 | |||||||||
| WBVar01934579 | |||||||||
| WBVar01305644 | |||||||||
| WBVar01538131 | |||||||||
| WBVar01538132 | |||||||||
| WBVar01499380 | |||||||||
| WBVar01499381 | |||||||||
| WBVar01499571 | |||||||||
| WBVar01499572 | |||||||||
| WBVar01499589 | |||||||||
| WBVar01499590 | |||||||||
| WBVar00364152 | |||||||||
| WBVar00364153 | |||||||||
| WBVar00364154 | |||||||||
| WBVar00364155 | |||||||||
| WBVar00237902 | |||||||||
| WBVar01783070 | |||||||||
| WBVar00726075 | |||||||||
| WBVar00726076 | |||||||||
| WBVar00726077 | |||||||||
| WBVar00726078 | |||||||||
| WBVar00726079 | |||||||||
| WBVar00726080 | |||||||||
| WBVar00726081 | |||||||||
| WBVar00726082 | |||||||||
| WBVar00726083 | |||||||||
| WBVar00726084 | |||||||||
| WBVar00726085 | |||||||||
| WBVar00726086 | |||||||||
| WBVar00726087 | |||||||||
| WBVar00726088 | |||||||||
| WBVar00726089 | |||||||||
| WBVar00726090 | |||||||||
| WBVar00171472 | |||||||||
| WBVar00171473 | |||||||||
| WBVar00171474 | |||||||||
| WBVar00171475 | |||||||||
| WBVar01499689 | |||||||||
| WBVar01499690 | |||||||||
| WBVar02129802 | |||||||||
| WBVar02010035 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (23) | |||||||||
| Structured_description | Automated_description | Enriched in amphid sheath cell; head mesodermal cell; hypodermis; mechanosensory neurons; and pm6 based on microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray; RNA-seq; and tiling array studies. Is affected by fourteen chemicals including tryptophan; Alovudine; and stavudine based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T05C1.1 | |||||||
| Corresponding_transcript | T05C1.1.1 | ||||||||
| Other_sequence | CD374705.1 | ||||||||
| WBC00585_1 | |||||||||
| Associated_feature | WBsf987612 | ||||||||
| WBsf987613 | |||||||||
| WBsf987614 | |||||||||
| WBsf1012092 | |||||||||
| WBsf221135 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00052481 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00035186 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1024280 | ||||||||
| Expr1038815 | |||||||||
| Expr1156106 | |||||||||
| Expr2005863 | |||||||||
| Expr2024080 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (119) | |||||||||
| Interaction | WBInteraction000199310 | ||||||||
| WBInteraction000266559 | |||||||||
| WBInteraction000286529 | |||||||||
| WBInteraction000398459 | |||||||||
| WBInteraction000421146 | |||||||||
| WBInteraction000434820 | |||||||||
| Map_info | Positive | Positive_clone | T05C1 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -4.33569 | |||||||
| Method | Gene |
