WormBase Tree Display for Gene: WBGene00020235
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| WBGene00020235 | SMap | S_parent | Sequence | T05A12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T05A12.4 | |||||||
| Molecular_name | T05A12.4 | ||||||||
| T05A12.4.1 | |||||||||
| CE37666 | |||||||||
| T05A12.4.2 | |||||||||
| Other_name | CELE_T05A12.4 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | T05A12.4 | ||||||||
| DB_info | Database | AceView | gene | 4H661 | |||||
| WormQTL | gene | WBGene00020235 | |||||||
| WormFlux | gene | WBGene00020235 | |||||||
| NDB | locus_tag | CELE_T05A12.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020235|UniProtKB=H2L0J8 | |||||||
| family | PTHR45865 | ||||||||
| NCBI | gene | 177453 | |||||||
| RefSeq | protein | NM_001028188.5 | |||||||
| TrEMBL | UniProtAcc | H2L0J8 | |||||||
| UniProt_GCRP | UniProtAcc | H2L0J8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (95) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00023132 | ||||||||
| 00023133 | |||||||||
| 00023134 | |||||||||
| 00023135 | |||||||||
| 00124917 | |||||||||
| 00124918 | |||||||||
| Ortholog (46) | |||||||||
| Paralog (19) | |||||||||
| Structured_description | Automated_description | Predicted to enable ubiquitin protein ligase activity. Predicted to be involved in DNA damage response and protein polyubiquitination. Is an ortholog of human SHPRH (SNF2 histone linker PHD RING helicase). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T05A12.4 | |||||||
| Corresponding_CDS_history | T05A12.4:wp122 | ||||||||
| T05A12.4:wp131 | |||||||||
| T05A12.4b:wp240 | |||||||||
| Corresponding_transcript | T05A12.4.1 | ||||||||
| T05A12.4.2 | |||||||||
| Associated_feature | WBsf646048 | ||||||||
| WBsf646049 | |||||||||
| WBsf646050 | |||||||||
| WBsf660249 | |||||||||
| WBsf996848 | |||||||||
| WBsf1017631 | |||||||||
| WBsf228476 | |||||||||
| WBsf228477 | |||||||||
| Experimental_info | RNAi_result (11) | ||||||||
| Expr_pattern | Expr1016773 | ||||||||
| Expr1038807 | |||||||||
| Expr1156060 | |||||||||
| Expr2005840 | |||||||||
| Expr2024057 | |||||||||
| Microarray_results (29) | |||||||||
| Expression_cluster (128) | |||||||||
| Interaction | WBInteraction000139685 | ||||||||
| WBInteraction000139723 | |||||||||
| WBInteraction000139788 | |||||||||
| WBInteraction000381901 | |||||||||
| WBInteraction000475191 | |||||||||
| WBInteraction000527470 | |||||||||
| Map_info | Positive | Positive_clone | T05A12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 3.24809 | |||||||
| Reference | WBPaper00005736 | ||||||||
| WBPaper00027315 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065308 | |||||||||
| Method | Gene |
