WormBase Tree Display for Gene: WBGene00020229
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WBGene00020229 | SMap | S_parent | Sequence | T05A8 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | T05A8.3 | |||||||
Molecular_name | T05A8.3 | ||||||||
T05A8.3.1 | |||||||||
CE51768 | |||||||||
Other_name | CELE_T05A8.3 | Accession_evidence | NDB | BX284602 | |||||
Public_name | T05A8.3 | ||||||||
DB_info | Database | AceView | gene | 2D6 | |||||
WormQTL | gene | WBGene00020229 | |||||||
WormFlux | gene | WBGene00020229 | |||||||
NDB | locus_tag | CELE_T05A8.3 | |||||||
NCBI | gene | 173615 | |||||||
RefSeq | protein | NM_001393023.1 | |||||||
TrEMBL | UniProtAcc | O44858 | |||||||
UniProt_GCRP | UniProtAcc | O44858 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (91) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog | WBGene00038759 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||
OMA | |||||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00054622 | Caenorhabditis remanei | From_analysis | OMA | ||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00145039 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00164072 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00179214 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | ||||||
WormBase-Compara | |||||||||
CSP26.g5005 | Caenorhabditis zanzibari | From_analysis | WormBase-Compara | ||||||
CSP28.g19513 | Caenorhabditis panamensis | From_analysis | WormBase-Compara | ||||||
CSP29.g21340 | Caenorhabditis becei | From_analysis | WormBase-Compara | ||||||
CSP32.g11081 | Caenorhabditis sulstoni | From_analysis | WormBase-Compara | ||||||
CSP39.g21734 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||||
CSP40.g3231 | Caenorhabditis tribulationis | From_analysis | WormBase-Compara | ||||||
Cni-T05A8.3 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | ||||||
FL83_10167 | Caenorhabditis latens | From_analysis | WormBase-Compara | ||||||
GCK72_006815 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
Sp34_20041400 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | ||||||
chrII_pilon.g3763 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Enriched in head mesodermal cell; neurons; retrovesicular ganglion; and ventral nerve cord based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including skn-1; eat-2; and clk-1 based on microarray and RNA-seq studies. Is affected by fourteen chemicals including rotenone; D-glucose; and stavudine based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | T05A8.3 | |||||||
Corresponding_CDS_history | T05A8.3:wp255 | ||||||||
Corresponding_transcript | T05A8.3.1 | ||||||||
Associated_feature | WBsf649939 | ||||||||
WBsf665406 | |||||||||
WBsf222789 | |||||||||
WBsf222790 | |||||||||
WBsf222791 | |||||||||
Experimental_info | RNAi_result | WBRNAi00035173 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00052455 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1022475 | ||||||||
Expr1038803 | |||||||||
Expr1156078 | |||||||||
Expr2005848 | |||||||||
Expr2024066 | |||||||||
Drives_construct | WBCnstr00025282 | ||||||||
Construct_product | WBCnstr00025282 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (197) | |||||||||
Interaction (8) | |||||||||
Map_info | Positive | Positive_clone | T05A8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | II | -11.8398 | |||||||
Reference | WBPaper00060275 | ||||||||
Method | Gene |