WormBase Tree Display for Gene: WBGene00020209
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| WBGene00020209 | SMap | S_parent | Sequence | CHROMOSOME_III | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T04C9.1 | |||||||
| Molecular_name | T04C9.1a | ||||||||
| T04C9.1a.1 | |||||||||
| CE32714 | |||||||||
| T04C9.1b | |||||||||
| CE32715 | |||||||||
| T04C9.1c | |||||||||
| CE34595 | |||||||||
| T04C9.1b.1 | |||||||||
| T04C9.1c.1 | |||||||||
| Other_name | CELE_T04C9.1 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | T04C9.1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (149) | |||||||||
| Strain | WBStrain00003738 | ||||||||
| WBStrain00003746 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (31) | |||||||||
| Ortholog (49) | |||||||||
| Structured_description | Concise_description | T04C9.1 is orthologous to the human gene GRAF PROTEIN (GRAF; OMIM:605370), which when mutated leads to disease | Curator_confirmed | WBPerson1823 | |||||
| WBPerson567 | |||||||||
| Date_last_updated | 09 Aug 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable GTPase activator activity. Predicted to be involved in signal transduction. Predicted to be located in cytoplasm. Expressed in head. Human ortholog(s) of this gene implicated in X-linked mental retardation with cerebellar hypoplasia and distinctive facial appearance; acute myelomonocytic leukemia; and juvenile myelomonocytic leukemia. Is an ortholog of several human genes including ARHGAP10 (Rho GTPase activating protein 10); ARHGAP26 (Rho GTPase activating protein 26); and OPHN1 (oligophrenin 1). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0080311 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8148) | ||||
| DOID:0081082 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:17073) | ||||||
| DOID:0050458 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:17073) | ||||||
| Molecular_info | Corresponding_CDS | T04C9.1a | |||||||
| T04C9.1b | |||||||||
| T04C9.1c | |||||||||
| Corresponding_CDS_history | T04C9.1:wp82 | ||||||||
| T04C9.1a:wp88 | |||||||||
| T04C9.1b:wp88 | |||||||||
| T04C9.1c:wp88 | |||||||||
| T04C9.1c:wp102 | |||||||||
| Corresponding_transcript | T04C9.1a.1 | ||||||||
| T04C9.1b.1 | |||||||||
| T04C9.1c.1 | |||||||||
| Other_sequence (66) | |||||||||
| Associated_feature (24) | |||||||||
| Experimental_info | RNAi_result (15) | ||||||||
| Expr_pattern | Expr6599 | ||||||||
| Expr6600 | |||||||||
| Expr1027775 | |||||||||
| Expr1038793 | |||||||||
| Expr1156005 | |||||||||
| Expr2005816 | |||||||||
| Expr2024033 | |||||||||
| Drives_construct | WBCnstr00004173 | ||||||||
| WBCnstr00004181 | |||||||||
| WBCnstr00025298 | |||||||||
| Construct_product | WBCnstr00025298 | ||||||||
| Microarray_results (39) | |||||||||
| Expression_cluster (125) | |||||||||
| Interaction (115) | |||||||||
| Map_info | Positive | Positive_clone | T04C9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -1.4274 | |||||||
| Reference | WBPaper00033469 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
