WormBase Tree Display for Gene: WBGene00020191
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WBGene00020191 | SMap | S_parent | Sequence | T03F1 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | clec-53 | Person_evidence | WBPerson655 | |||
Sequence_name | T03F1.10 | ||||||
Molecular_name | T03F1.10 | ||||||
T03F1.10.1 | |||||||
CE38630 | |||||||
Other_name | CELE_T03F1.10 | Accession_evidence | NDB | BX284601 | |||
Public_name | clec-53 | ||||||
DB_info | Database | AceView | gene | 1E440 | |||
WormQTL | gene | WBGene00020191 | |||||
WormFlux | gene | WBGene00020191 | |||||
NDB | locus_tag | CELE_T03F1.10 | |||||
Panther | gene | CAEEL|WormBase=WBGene00020191|UniProtKB=P91429 | |||||
family | PTHR22803 | ||||||
NCBI | gene | 171967 | |||||
RefSeq | protein | NM_058846.6 | |||||
TrEMBL | UniProtAcc | P91429 | |||||
UniProt_GCRP | UniProtAcc | P91429 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | clec | ||||||
Allele (22) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00051025 | ||||||
Ortholog (35) | |||||||
Paralog (12) | |||||||
Structured_description | Automated_description | Predicted to enable signaling receptor activity. Human ortholog(s) of this gene implicated in Alzheimer's disease; autoimmune disease (multiple); and cholangiocarcinoma. Is an ortholog of human REG1A (regenerating family member 1 alpha). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:10652 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9951) | ||
DOID:9744 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9951) | ||||
DOID:4947 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9951) | ||||
DOID:12894 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9951) | ||||
Molecular_info | Corresponding_CDS | T03F1.10 | |||||
Corresponding_CDS_history | T03F1.10:wp143 | ||||||
T03F1.10:wp189 | |||||||
Corresponding_transcript | T03F1.10.1 | ||||||
Associated_feature | WBsf664082 | ||||||
WBsf979014 | |||||||
WBsf219195 | |||||||
Experimental_info | RNAi_result | WBRNAi00052278 | Inferred_automatically | RNAi_primary | |||
WBRNAi00035092 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00089143 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00004115 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr10627 | ||||||
Expr1155910 | |||||||
Expr2010186 | |||||||
Expr2028428 | |||||||
Drives_construct | WBCnstr00025311 | ||||||
Construct_product | WBCnstr00025311 | ||||||
Microarray_results (14) | |||||||
Expression_cluster (183) | |||||||
Interaction | WBInteraction000119063 | ||||||
WBInteraction000119064 | |||||||
WBInteraction000122783 | |||||||
WBInteraction000122817 | |||||||
WBInteraction000123896 | |||||||
WBInteraction000123897 | |||||||
WBInteraction000124037 | |||||||
WBInteraction000363527 | |||||||
WBInteraction000442915 | |||||||
WBInteraction000570656 | |||||||
Map_info | Map | I | Position | -1.95526 | Error | 0.003013 | |
Positive | Positive_clone | T03F1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00038491 | ||||||
WBPaper00055090 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |