WormBase Tree Display for Gene: WBGene00020128
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| WBGene00020128 | SMap | S_parent | Sequence | CHROMOSOME_X | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | R193.2 | |||||||
| Molecular_name | R193.2 | ||||||||
| R193.2.1 | |||||||||
| CE48098 | |||||||||
| Other_name | CELE_R193.2 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | R193.2 | ||||||||
| DB_info | Database | AceView | gene | XB752 | |||||
| WormQTL | gene | WBGene00020128 | |||||||
| WormFlux | gene | WBGene00020128 | |||||||
| NDB | locus_tag | CELE_R193.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020128|UniProtKB=Q9N5F6 | |||||||
| family | PTHR22588 | ||||||||
| NCBI | gene | 182256 | |||||||
| RefSeq | protein | NM_075817.5 | |||||||
| TrEMBL | UniProtAcc | Q9N5F6 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N5F6 | |||||||
| OMIM | gene | 120250 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 23 Jul 2004 11:11:23 | WBPerson1849 | Event | Acquires_merge | WBGene00015475 | ||||
| Acquires_merge | WBGene00015475 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (147) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00095396 | ||||||||
| Ortholog (26) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. Human ortholog(s) of this gene implicated in Bethlem myopathy; Ullrich congenital muscular dystrophy; and dystonia 27. Is an ortholog of human COL6A3 (collagen type VI alpha 3 chain). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model (17) | ||||||||
| Molecular_info | Corresponding_CDS | R193.2 | |||||||
| Corresponding_CDS_history | R193.2:wp128 | ||||||||
| R193.2:wp171 | |||||||||
| R193.2:wp236 | |||||||||
| Corresponding_transcript | R193.2.1 | ||||||||
| Other_sequence | CBC03966_1 | ||||||||
| Associated_feature | WBsf653687 | ||||||||
| WBsf1003955 | |||||||||
| WBsf1003956 | |||||||||
| WBsf1003957 | |||||||||
| WBsf1003958 | |||||||||
| WBsf1022221 | |||||||||
| WBsf237006 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00017897 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00052019 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00009082 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00039766 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00010218 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00028507 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1023854 | ||||||||
| Expr1038754 | |||||||||
| Expr1155659 | |||||||||
| Expr2005674 | |||||||||
| Expr2023890 | |||||||||
| Drives_construct | WBCnstr00025356 | ||||||||
| Construct_product | WBCnstr00025356 | ||||||||
| Microarray_results | SMD_C05D9.8 | ||||||||
| SMD_R193.C | |||||||||
| SMD_R193.D | |||||||||
| 178464_at | |||||||||
| 184144_at | |||||||||
| A_12_P104213 | |||||||||
| A_12_P116980 | |||||||||
| A_12_P139930 | |||||||||
| A_12_P139931 | |||||||||
| Aff_C05D9.8 | |||||||||
| GPL13394_WBGene00020128 | |||||||||
| GPL13914_R193.2 | |||||||||
| GPL14144_R193.2_1212-1271_0.800_96_C | |||||||||
| GPL14144_R193.2_321-380_0.808_81_B | |||||||||
| GPL14144_R193.2_3322-3381_0.808_78_A | |||||||||
| GPL19516_CGZ0012227 | |||||||||
| GPL19516_CGZ0032387 | |||||||||
| GPL21109_Cat_R193.2 | |||||||||
| GPL21109_R193.2 | |||||||||
| GPL3518_CE23520 | |||||||||
| GPL3518_CE23929 | |||||||||
| GPL8304_CE_WBGene00020128_A | |||||||||
| GPL8673_R193_2P04384 | |||||||||
| GPL8673_R193_2P04636 | |||||||||
| GPL8673_R193_2P05408 | |||||||||
| GPL9450_R193.2 | |||||||||
| cea2.p.152273 | |||||||||
| Expression_cluster (290) | |||||||||
| Interaction | WBInteraction000551540 | ||||||||
| Map_info | Positive | Positive_clone | R193 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -18.485 | |||||||
| Reference | WBPaper00026952 | ||||||||
| WBPaper00061938 | |||||||||
| Method | Gene |
