WormBase Tree Display for Gene: WBGene00020107
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| WBGene00020107 | SMap | S_parent | Sequence | R151 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | R151.2 | |||||||
| Molecular_name (13) | |||||||||
| Other_name | CELE_R151.2 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | R151.2 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (80) | |||||||||
| Strain | WBStrain00002215 | ||||||||
| WBStrain00037615 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (17) | |||||||||
| Contained_in_operon | CEOP3836 | ||||||||
| Ortholog (52) | |||||||||
| Paralog | WBGene00012258 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | R151.2 is orthologous to the human gene PHOSPHORIBOSYL PYROPHOSPHATE SYNTHETASE 1 (PRPS1; OMIM:311850), which when mutated leads to disease | Curator_confirmed | WBPerson1823 | |||||
| WBPerson567 | |||||||||
| Date_last_updated | 09 Aug 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable ATP binding activity and ribose phosphate diphosphokinase activity. Predicted to be involved in 5-phosphoribose 1-diphosphate biosynthetic process and purine nucleotide biosynthetic process. Predicted to be located in cytoplasm. Predicted to be part of ribose phosphate diphosphokinase complex. Expressed in head; somatic gonad precursor; somatic nervous system; and tail. Human ortholog(s) of this gene implicated in several diseases, including Arts syndrome; X-linked deafness 1; and X-linked recessive disease (multiple). Is an ortholog of human PRPS1 (phosphoribosyl pyrophosphate synthetase 1); PRPS1L1 (phosphoribosyl pyrophosphate synthetase 1 like 1); and PRPS2 (phosphoribosyl pyrophosphate synthetase 2). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0111739 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9462) | ||||
| DOID:0111260 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9462) | ||||||
| DOID:0110210 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9462) | ||||||
| DOID:13189 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9462) | ||||||
| DOID:0050647 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9462) | ||||||
| DOID:10584 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9462) | ||||||
| Molecular_info | Corresponding_CDS | R151.2a | |||||||
| R151.2b | |||||||||
| R151.2c | |||||||||
| R151.2d | |||||||||
| Corresponding_transcript | R151.2a.1 | ||||||||
| R151.2b.1 | |||||||||
| R151.2c.1 | |||||||||
| R151.2d.1 | |||||||||
| R151.2d.2 | |||||||||
| Other_sequence (134) | |||||||||
| Associated_feature (15) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00051974 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00002470 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005213 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00051975 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00034940 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram338 | ||||||||
| Chronogram447 | |||||||||
| Expr6545 | |||||||||
| Expr14795 | |||||||||
| Expr14796 | |||||||||
| Expr1024029 | |||||||||
| Expr1038744 | |||||||||
| Expr1155618 | |||||||||
| Expr2005657 | |||||||||
| Expr2023873 | |||||||||
| Drives_construct | WBCnstr00002957 | ||||||||
| WBCnstr00003960 | |||||||||
| WBCnstr00025371 | |||||||||
| Construct_product | WBCnstr00025371 | ||||||||
| Microarray_results (47) | |||||||||
| Expression_cluster (153) | |||||||||
| Interaction (159) | |||||||||
| Map_info | Positive | Positive_clone | R151 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -0.769223 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00056826 | |||||||||
| WBPaper00061547 | |||||||||
| Method | Gene |
