WormBase Tree Display for Gene: WBGene00020093
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WBGene00020093 | SMap | S_parent | Sequence | R144 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | R144.3 | |||||||
Molecular_name | R144.3a | ||||||||
R144.3a.1 | |||||||||
CE41692 | |||||||||
R144.3b | |||||||||
CE39271 | |||||||||
R144.3b.1 | |||||||||
Other_name | CELE_R144.3 | Accession_evidence | NDB | BX284603 | |||||
Public_name | R144.3 | ||||||||
DB_info | Database | AceView | gene | 3G113 | |||||
3G115 | |||||||||
WormQTL | gene | WBGene00020093 | |||||||
WormFlux | gene | WBGene00020093 | |||||||
NDB | locus_tag | CELE_R144.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00020093|UniProtKB=F5GU47 | |||||||
family | PTHR12901 | ||||||||
NCBI | gene | 187900 | |||||||
RefSeq | protein | NM_001267994.3 | |||||||
NM_001382857.2 | |||||||||
TrEMBL | UniProtAcc | F5GU47 | |||||||
H2KZ21 | |||||||||
UniProt_GCRP | UniProtAcc | F5GU47 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (17) | |||||||||
Strain | WBStrain00032834 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00008648 | ||||||||
Contained_in_operon | CEOP3256 | ||||||||
Ortholog (23) | |||||||||
Paralog | WBGene00044648 | Caenorhabditis elegans | From_analysis | Panther | |||||
Structured_description | Automated_description | Predicted to be located in mitochondrion. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | R144.3a | |||||||
R144.3b | |||||||||
Corresponding_CDS_history | R144.3:wp142 | ||||||||
R144.3:wp150 | |||||||||
R144.3:wp183 | |||||||||
Corresponding_transcript (2) | |||||||||
Associated_feature | WBsf978368 | ||||||||
WBsf1014829 | |||||||||
WBsf224839 | |||||||||
WBsf224840 | |||||||||
Transcription_factor | WBTranscriptionFactor000843 | ||||||||
Experimental_info | RNAi_result | WBRNAi00087235 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00085241 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00068053 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00005600 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00051957 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00081676 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00026123 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr10421 | ||||||||
Expr10422 | |||||||||
Expr10423 | |||||||||
Expr1025162 | |||||||||
Expr1038732 | |||||||||
Expr1155603 | |||||||||
Expr2005649 | |||||||||
Expr2023865 | |||||||||
Drives_construct | WBCnstr00015317 | ||||||||
WBCnstr00015318 | |||||||||
WBCnstr00025377 | |||||||||
Construct_product | WBCnstr00025377 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (55) | |||||||||
SAGE_tag | SAGE:cttgttgtgtggaaaga | Strand | Sense | ||||||
Unambiguously_mapped | |||||||||
SAGE:aaaaatcctaataaacg | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:tcaaattgtt | Strand | Antisense | |||||||
SAGE:aaaaatccta | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:tcaaagttacggtaacc | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:aaaattaaca | Strand | Antisense | |||||||
SAGE:cacccaaatc | Strand | Antisense | |||||||
SAGE:gctgagtatt | Strand | Antisense | |||||||
SAGE:cttgttgtgt | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:gctgagtattttctttt | Strand | Antisense | |||||||
Interaction (81) | |||||||||
Map_info | Positive | Positive_clone | R144 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | III | -2.2185 | |||||||
Method | Gene |