WormBase Tree Display for Gene: WBGene00020082
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| WBGene00020082 | SMap | S_parent | Sequence | CHROMOSOME_X | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | gcp-2.1 | Person_evidence | WBPerson683 | |||||
| Sequence_name | R57.1 | ||||||||
| Molecular_name | R57.1a | ||||||||
| R57.1a.1 | |||||||||
| CE30114 | |||||||||
| R57.1b | |||||||||
| CE37270 | |||||||||
| R57.1c | |||||||||
| CE12844 | |||||||||
| R57.1b.1 | |||||||||
| R57.1c.1 | |||||||||
| Other_name | CELE_R57.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | gcp-2.1 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 17 Apr 2013 09:53:02 | WBPerson2970 | Name_change | CGC_name | gcp-2.1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gcp | ||||||||
| Allele (109) | |||||||||
| Strain | WBStrain00031761 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Ortholog (46) | |||||||||
| Paralog | WBGene00007954 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00044121 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| Structured_description | Automated_description | Predicted to enable metallocarboxypeptidase activity. Predicted to be involved in proteolysis. Predicted to be located in membrane. Is an ortholog of human FOLH1 (folate hydrolase 1); NAALAD2 (N-acetylated alpha-linked acidic dipeptidase 2); and NAALADL1 (N-acetylated alpha-linked acidic dipeptidase like 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:7693 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3788) | ||||
| DOID:3526 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3788) | ||||||
| Molecular_info | Corresponding_CDS | R57.1a | |||||||
| R57.1b | |||||||||
| R57.1c | |||||||||
| Corresponding_CDS_history | R57.1a:wp98 | ||||||||
| R57.1a:wp129 | |||||||||
| R57.1b:wp98 | |||||||||
| R57.1b:wp129 | |||||||||
| Corresponding_transcript | R57.1a.1 | ||||||||
| R57.1b.1 | |||||||||
| R57.1c.1 | |||||||||
| Other_sequence (51) | |||||||||
| Associated_feature | WBsf662403 | ||||||||
| WBsf235252 | |||||||||
| WBsf235253 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00052044 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00017915 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00034973 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1010413 | ||||||||
| Expr1038722 | |||||||||
| Expr1155679 | |||||||||
| Expr2011970 | |||||||||
| Expr2030207 | |||||||||
| Drives_construct | WBCnstr00022811 | ||||||||
| WBCnstr00025382 | |||||||||
| Construct_product | WBCnstr00025382 | ||||||||
| Microarray_results | SMD_R57.1 | ||||||||
| 190113_at | |||||||||
| A_12_P108728 | |||||||||
| A_12_P110081 | |||||||||
| Aff_R57.1 | |||||||||
| GPL13394_WBGene00020082 | |||||||||
| GPL13914_R57.1 | |||||||||
| GPL14144_R57.1a_1520-1579_0.891_22_B | |||||||||
| GPL14144_R57.1a_1639-1698_0.877_28_C | |||||||||
| GPL14144_R57.1a_1710-1769_0.918_10_A | |||||||||
| GPL19516_CGZ0032434 | |||||||||
| GPL19516_CGZ0032435 | |||||||||
| GPL19516_CGZ0032436 | |||||||||
| GPL21109_R57.1a | |||||||||
| GPL21109_R57.1b | |||||||||
| GPL21109_R57.3 | |||||||||
| GPL3518_CE30114 | |||||||||
| GPL8304_CE_WBGene00020082_A | |||||||||
| GPL8304_CE_WBGene00020082_B | |||||||||
| GPL8304_CE_WBGene00020082_C | |||||||||
| GPL8673_R57_1aP01101 | |||||||||
| GPL8673_R57_1aP01810 | |||||||||
| GPL8673_R57_1aP02092 | |||||||||
| GPL8673_R57_1bP00377 | |||||||||
| GPL8673_R57_1bP00605 | |||||||||
| GPL8673_R57_1bP01044 | |||||||||
| GPL8673_R57_1cP01044 | |||||||||
| GPL8673_R57_1cP01753 | |||||||||
| GPL8673_R57_1cP02035 | |||||||||
| GPL9450_R57.1 | |||||||||
| cea2.p.152147 | |||||||||
| Expression_cluster (169) | |||||||||
| Interaction (48) | |||||||||
| Map_info | Map | X | Position | -20.1873 | |||||
| Positive | Positive_clone | R57 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00049244 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00066339 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
