WormBase Tree Display for Gene: WBGene00020040
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| WBGene00020040 | SMap | S_parent | Sequence | R12E2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | R12E2.15 | |||||||
| Molecular_name | R12E2.15 | ||||||||
| R12E2.15.1 | |||||||||
| CE18147 | |||||||||
| R12E2.15.2 | |||||||||
| Other_name | CELE_R12E2.15 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | R12E2.15 | ||||||||
| DB_info | Database | AceView | gene | 1E716 | |||||
| WormQTL | gene | WBGene00020040 | |||||||
| WormFlux | gene | WBGene00020040 | |||||||
| NDB | locus_tag | CELE_R12E2.15 | |||||||
| NCBI | gene | 172000 | |||||||
| RefSeq | protein | NM_001392100.1 | |||||||
| TrEMBL | UniProtAcc | O61781 | |||||||
| UniProt_GCRP | UniProtAcc | O61781 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (14) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00033064 | Caenorhabditis briggsae | From_analysis | OMA | |||||
| WBGene00033066 | Caenorhabditis briggsae | From_analysis | OMA | ||||||
| WBGene00033065 | Caenorhabditis briggsae | From_analysis | OMA | ||||||
| WBGene00062342 | Caenorhabditis remanei | From_analysis | OMA | ||||||
| WBGene00083072 | Caenorhabditis remanei | From_analysis | OMA | ||||||
| WBGene00142181 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
| WBGene00062340 | Caenorhabditis remanei | From_analysis | OMA | ||||||
| chrI_pilon.g647 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in several structures, including carbon dioxide sensory neurons; cholinergic neurons; germline precursor cell; pharyngeal muscle cell; and tail hypodermis based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; and tiling array studies. Is affected by thirty-three chemicals including hydrogen sulfide; methylmercury hydroxide; and 1-methylnicotinamide based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R12E2.15 | |||||||
| Corresponding_transcript | R12E2.15.1 | ||||||||
| R12E2.15.2 | |||||||||
| Associated_feature | WBsf649079 | ||||||||
| WBsf983346 | |||||||||
| WBsf1009627 | |||||||||
| WBsf219245 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00051852 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00004085 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00034891 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022519 | ||||||||
| Expr1038710 | |||||||||
| Expr1155511 | |||||||||
| Expr2005617 | |||||||||
| Expr2023834 | |||||||||
| Drives_construct | WBCnstr00025409 | ||||||||
| Construct_product | WBCnstr00025409 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (291) | |||||||||
| Interaction (149) | |||||||||
| Map_info | Positive | Positive_clone | R12E2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | -1.69657 | |||||||
| Reference | WBPaper00064623 | ||||||||
| Method | Gene |
