WormBase Tree Display for Gene: WBGene00020038
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| WBGene00020038 | SMap | S_parent | Sequence | R12E2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | R12E2.13 | |||||||
| Molecular_name | R12E2.13 | ||||||||
| R12E2.13.1 | |||||||||
| CE18145 | |||||||||
| Other_name | CELE_R12E2.13 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | R12E2.13 | ||||||||
| DB_info | Database | AceView | gene | 1E746 | |||||
| WormQTL | gene | WBGene00020038 | |||||||
| WormFlux | gene | WBGene00020038 | |||||||
| NDB | locus_tag | CELE_R12E2.13 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020038|UniProtKB=O61793 | |||||||
| family | PTHR46809 | ||||||||
| NCBI | gene | 172010 | |||||||
| RefSeq | protein | NM_058919.5 | |||||||
| TREEFAM | TREEFAM_ID | TF314557 | |||||||
| TrEMBL | UniProtAcc | O61793 | |||||||
| UniProt_GCRP | UniProtAcc | O61793 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (15) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00036366 | ||||||||
| 00105724 | |||||||||
| Ortholog (38) | |||||||||
| Structured_description | Automated_description | Involved in innate immune response. Acts upstream of or within IRE1-mediated unfolded protein response. Is an ortholog of human SDF2 (stromal cell derived factor 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R12E2.13 | |||||||
| Corresponding_transcript | R12E2.13.1 | ||||||||
| Other_sequence (33) | |||||||||
| Associated_feature | WBsf649084 | ||||||||
| WBsf649085 | |||||||||
| WBsf664130 | |||||||||
| WBsf664131 | |||||||||
| WBsf664132 | |||||||||
| WBsf664133 | |||||||||
| WBsf219253 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00034889 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00117085 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00004083 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00076614 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00051850 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram434 | ||||||||
| Expr6516 | |||||||||
| Expr1015853 | |||||||||
| Expr1038709 | |||||||||
| Expr1155509 | |||||||||
| Expr2005615 | |||||||||
| Expr2023832 | |||||||||
| Drives_construct | WBCnstr00003959 | ||||||||
| WBCnstr00025411 | |||||||||
| Construct_product | WBCnstr00025411 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (77) | |||||||||
| Interaction (55) | |||||||||
| Map_info | Positive | Positive_clone | R12E2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | -1.6323 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064339 | |||||||||
| Method | Gene |
