WormBase Tree Display for Gene: WBGene00020015
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| WBGene00020015 | SMap | S_parent | Sequence | R11G11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nhr-210 | Person_evidence | WBPerson600 | |||||
| Sequence_name | R11G11.12 | ||||||||
| Molecular_name | R11G11.12a | ||||||||
| R11G11.12a.1 | |||||||||
| CE52655 | |||||||||
| Other_name | CELE_R11G11.12 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | nhr-210 | ||||||||
| DB_info | Database | AceView | gene | 5A990 | |||||
| WormQTL | gene | WBGene00020015 | |||||||
| WormFlux | gene | WBGene00020015 | |||||||
| NDB | locus_tag | CELE_R11G11.12 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020015|UniProtKB=O16954 | |||||||
| family | PTHR45680 | ||||||||
| NCBI | gene | 187830 | |||||||
| RefSeq | protein | NM_001364046.3 | |||||||
| TrEMBL | UniProtAcc | O16954 | |||||||
| UniProt_GCRP | UniProtAcc | O16954 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 22 Jul 2005 10:29:12 | WBPerson2970 | Name_change | CGC_name | nhr-210 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| Allele (103) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00029016 | ||||||||
| 00029017 | |||||||||
| 00029018 | |||||||||
| 00029019 | |||||||||
| 00124737 | |||||||||
| 00124738 | |||||||||
| 00124739 | |||||||||
| 00124740 | |||||||||
| Ortholog (22) | |||||||||
| Paralog (217) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R11G11.12a | |||||||
| Corresponding_CDS_history | R11G11.12:wp248 | ||||||||
| R11G11.12a:wp265 | |||||||||
| Corresponding_transcript | R11G11.12a.1 | ||||||||
| Other_sequence | MI08399 | ||||||||
| MI01793 | |||||||||
| Associated_feature | WBsf652444 | ||||||||
| WBsf981880 | |||||||||
| WBsf233271 | |||||||||
| Transcription_factor | WBTranscriptionFactor000741 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00051809 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00017767 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1017029 | ||||||||
| Expr1155470 | |||||||||
| Expr2014114 | |||||||||
| Expr2032353 | |||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (117) | |||||||||
| Interaction | WBInteraction000176413 | ||||||||
| WBInteraction000271262 | |||||||||
| Map_info | Map | V | Position | -19.9835 | |||||
| Positive | Positive_clone | R11G11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5368 | |||||||
| 4815 | |||||||||
| 4848 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00026592 | ||||||||
| WBPaper00027309 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
