WormBase Tree Display for Gene: WBGene00019967
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WBGene00019967 | SMap | S_parent | Sequence | R08F11 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | cyp | ||||||
Allele (53) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (14) | |||||||
Ortholog (134) | |||||||
Paralog (44) | |||||||
Structured_description | Automated_description | Predicted to enable heme binding activity; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen; and steroid hydroxylase activity. Predicted to be involved in organic acid metabolic process and xenobiotic metabolic process. Predicted to be located in cytoplasm and intracellular membrane-bounded organelle. Human ortholog(s) of this gene implicated in end stage renal disease and renal hypertension. Is an ortholog of human CYP2C8 (cytochrome P450 family 2 subfamily C member 8). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:783 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2622) | ||
DOID:1073 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2622) | ||||
Molecular_info | Corresponding_CDS | R08F11.3 | |||||
Corresponding_transcript | R08F11.3.1 | ||||||
Other_sequence | FC549891.1 | ||||||
ACC23062_1 | |||||||
FC548150.1 | |||||||
XIC02276_1 | |||||||
Tcir_isotig20566 | |||||||
MI03585 | |||||||
XI02955 | |||||||
MH09037 | |||||||
BXC02674_1 | |||||||
Associated_feature | WBsf652548 | ||||||
WBsf981918 | |||||||
WBsf999690 | |||||||
WBsf233528 | |||||||
Experimental_info | RNAi_result | WBRNAi00092662 | Inferred_automatically | RNAi_primary | |||
WBRNAi00051558 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00017598 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00034755 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1011139 | ||||||
Expr1155236 | |||||||
Expr2010719 | |||||||
Expr2028957 | |||||||
Drives_construct | WBCnstr00025460 | ||||||
Construct_product | WBCnstr00025460 | ||||||
Microarray_results (18) | |||||||
Expression_cluster (354) | |||||||
Interaction | WBInteraction000122613 | ||||||
WBInteraction000123131 | |||||||
WBInteraction000123153 | |||||||
WBInteraction000123164 | |||||||
WBInteraction000123290 | |||||||
WBInteraction000123294 | |||||||
WBInteraction000123505 | |||||||
WBInteraction000123547 | |||||||
WBInteraction000123591 | |||||||
WBInteraction000123619 | |||||||
WBInteraction000123645 | |||||||
WBInteraction000123676 | |||||||
WBInteraction000123743 | |||||||
WBInteraction000123762 | |||||||
WBInteraction000123780 | |||||||
WBInteraction000123797 | |||||||
WBInteraction000123813 | |||||||
WBInteraction000123828 | |||||||
WBInteraction000123876 | |||||||
WBInteraction000123877 | |||||||
WBInteraction000123878 | |||||||
WBInteraction000123879 | |||||||
WBInteraction000123880 | |||||||
WBInteraction000123881 | |||||||
WBInteraction000123882 | |||||||
WBInteraction000123883 | |||||||
WBInteraction000123884 | |||||||
WBInteraction000123885 | |||||||
WBInteraction000123886 | |||||||
WBInteraction000123887 | |||||||
WBInteraction000155645 | |||||||
WBInteraction000156235 | |||||||
WBInteraction000374951 | |||||||
WBInteraction000505254 | |||||||
WBInteraction000520276 | |||||||
WBInteraction000543107 | |||||||
WBInteraction000543110 | |||||||
WBInteraction000543112 | |||||||
WBInteraction000543113 | |||||||
WBInteraction000543115 | |||||||
WBInteraction000571768 | |||||||
WBInteraction000581135 | |||||||
Map_info | Map | V | Position | -7.99046 | Error | 0.000812 | |
Positive | Positive_clone | R08F11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00031529 | ||||||
WBPaper00038491 | |||||||
WBPaper00042257 | |||||||
WBPaper00049920 | |||||||
WBPaper00055090 | |||||||
WBPaper00060760 | |||||||
WBPaper00065331 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |