WormBase Tree Display for Gene: WBGene00019952
expand all nodes | collapse all nodes | view schema
| WBGene00019952 | SMap | S_parent | Sequence | R08C7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxb-74 | Person_evidence | WBPerson655 | |||||
| Sequence_name | R08C7.9 | ||||||||
| Molecular_name | R08C7.9 | ||||||||
| R08C7.9.1 | |||||||||
| CE49020 | |||||||||
| Other_name | CELE_R08C7.9 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | fbxb-74 | ||||||||
| DB_info | Database | AceView | gene | 4F202 | |||||
| WormQTL | gene | WBGene00019952 | |||||||
| WormFlux | gene | WBGene00019952 | |||||||
| NDB | locus_tag | CELE_R08C7.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019952|UniProtKB=Q21842 | |||||||
| family | PTHR22899 | ||||||||
| NCBI | gene | 177210 | |||||||
| RefSeq | protein | NM_068164.7 | |||||||
| TrEMBL | UniProtAcc | Q21842 | |||||||
| UniProt_GCRP | UniProtAcc | Q21842 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 12 Dec 2005 17:22:20 | WBPerson2970 | Name_change | CGC_name | fbxb-74 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxb | ||||||||
| Allele (26) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (36) | |||||||||
| Paralog (143) | |||||||||
| Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; its encoded protein also contains a Pfam-B45 motif of presently unknown function. | Paper_evidence | WBPaper00012854 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enriched in several structures, including ABalapppaa; MSpppaaa; RMEV; anterior ganglion (post); and head mesodermal cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray; proteomic; and RNA-seq studies. Is affected by fourteen chemicals including methylmercuric chloride; rotenone; and indole based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box domain; F-box associated; and F-box associated domain, type 2. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R08C7.9 | |||||||
| Corresponding_CDS_history | R08C7.9:wp97 | ||||||||
| R08C7.9:wp239 | |||||||||
| Corresponding_transcript | R08C7.9.1 | ||||||||
| Associated_feature | WBsf651730 | ||||||||
| WBsf667878 | |||||||||
| WBsf996266 | |||||||||
| WBsf996267 | |||||||||
| WBsf1017236 | |||||||||
| WBsf229961 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00017584 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1038663 | ||||||||
| Expr1155218 | |||||||||
| Expr2011675 | |||||||||
| Expr2029914 | |||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (106) | |||||||||
| Interaction (217) | |||||||||
| Map_info | Map | IV | Position | 0.254271 | Error | 0.005039 | |||
| Positive | Positive_clone | R08C7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00012854 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
