WormBase Tree Display for Gene: WBGene00019900

WBGene00019900 SMap: S_parent: Sequence: R05G6
  Identity: Version: 2
    Name: CGC_name: vdac-1 Person_evidence: WBPerson610
      Sequence_name: R05G6.7
      Molecular_name: R05G6.7
        R05G6.7.1
        CE29443
      Other_name: CELE_R05G6.7 Accession_evidence: NDB BX284604
      Public_name: vdac-1
    DB_info: Database: AceView gene 4I272
        WormQTL gene WBGene00019900
        WormFlux gene WBGene00019900
        NDB locus_tag CELE_R05G6.7
        Panther gene CAEEL|WormBase=WBGene00019900|UniProtKB=Q21752
          family PTHR11743
        NCBI gene 177524
        RefSeq protein NM_068810.9
        SwissProt UniProtAcc Q21752
        TREEFAM TREEFAM_ID TF315091
        UniProt_GCRP UniProtAcc Q21752
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:02 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 26 Feb 2013 11:46:04 WBPerson2970 Name_change: CGC_name: vdac-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: vdac
    Allele (28)
    RNASeq_FPKM (74)
    GO_annotation (17)
    Ortholog (49)
    Structured_description: Automated_description: Predicted to enable voltage-gated monoatomic anion channel activity. Involved in mitochondrion organization. Acts upstream of or within with a positive effect on olfactory behavior. Located in mitochondrion. Expressed in AWCL and AWCR. Human ortholog(s) of this gene implicated in Parkinson's disease; Parkinsonism; and prostate cancer. Is an ortholog of human VDAC1 (voltage dependent anion channel 1) and VDAC2 (voltage dependent anion channel 2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:10283 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:12669)
      DOID:14330 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:12669)
      DOID:0080855 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:12669)
  Molecular_info: Corresponding_CDS: R05G6.7
    Corresponding_transcript: R05G6.7.1
    Other_sequence (117)
    Associated_feature: WBsf655519
      WBsf668032
      WBsf981784
      WBsf996995
      WBsf1017725
      WBsf230282
      WBsf230283
  Experimental_info: RNAi_result: WBRNAi00116401 Inferred_automatically: RNAi_primary
      WBRNAi00051327 Inferred_automatically: RNAi_primary
      WBRNAi00017468 Inferred_automatically: RNAi_primary
      WBRNAi00116348 Inferred_automatically: RNAi_primary
      WBRNAi00034629 Inferred_automatically: RNAi_primary
    Expr_pattern (11)
    Drives_construct: WBCnstr00003485
      WBCnstr00021055
      WBCnstr00025510
    Construct_product: WBCnstr00021054
      WBCnstr00025510
    Microarray_results (20)
    Expression_cluster (168)
    Interaction (178)
  Map_info: Map: IV Position: 3.34071
    Positive: Positive_clone: R05G6 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (16)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene