WormBase Tree Display for Gene: WBGene00019825
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| WBGene00019825 | SMap | S_parent | Sequence | R02D3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | R02D3.8 | |||||||
| Molecular_name | R02D3.8 | ||||||||
| R02D3.8.1 | |||||||||
| CE18102 | |||||||||
| Other_name | CELE_R02D3.8 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | R02D3.8 | ||||||||
| DB_info | Database | AceView | gene | 4B10 | |||||
| WormQTL | gene | WBGene00019825 | |||||||
| WormFlux | gene | WBGene00019825 | |||||||
| NDB | locus_tag | CELE_R02D3.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019825|UniProtKB=Q9TZZ9 | |||||||
| family | PTHR23044 | ||||||||
| NCBI | gene | 176845 | |||||||
| RefSeq | protein | NM_067486.4 | |||||||
| TREEFAM | TREEFAM_ID | TF313449 | |||||||
| TrEMBL | UniProtAcc | Q9TZZ9 | |||||||
| UniProt_GCRP | UniProtAcc | Q9TZZ9 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (16) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00098221 | ||||||||
| 00098222 | |||||||||
| 00098223 | |||||||||
| 00098224 | |||||||||
| 00098225 | |||||||||
| 00098226 | |||||||||
| 00098227 | |||||||||
| 00098228 | |||||||||
| 00105828 | |||||||||
| 00124591 | |||||||||
| Ortholog (33) | |||||||||
| Paralog | WBGene00000797 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00001332 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00019724 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable 3'-5'-RNA exonuclease activity. Involved in PERK-mediated unfolded protein response and innate immune response. Predicted to be located in cytoplasm. Is an ortholog of human ERI3 (ERI1 exoribonuclease family member 3). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R02D3.8 | |||||||
| Corresponding_transcript | R02D3.8.1 | ||||||||
| Other_sequence | Dviv_isotig10955 | ||||||||
| JI176967.1 | |||||||||
| FK802011.1 | |||||||||
| Dviv_isotig10956 | |||||||||
| Hbac_isotig03023 | |||||||||
| FG980356.1 | |||||||||
| Tcir_isotig04265 | |||||||||
| Dviv_isotig10954 | |||||||||
| Associated_feature | WBsf651610 | ||||||||
| WBsf229660 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00051129 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00061860 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00034532 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00062324 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00051130 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00018972 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00017317 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1038592 | ||||||||
| Expr1154838 | |||||||||
| Expr2005317 | |||||||||
| Expr2023537 | |||||||||
| Drives_construct | WBCnstr00025569 | ||||||||
| Construct_product | WBCnstr00025569 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (118) | |||||||||
| Interaction (24) | |||||||||
| Map_info | Positive | Positive_clone | R02D3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | -26.7749 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
