WormBase Tree Display for Gene: WBGene00019824
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| WBGene00019824 | SMap | S_parent | Sequence | R02D3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | rcat-1 | Paper_evidence | WBPaper00062517 | |||||
| Sequence_name | R02D3.7 | ||||||||
| Molecular_name | R02D3.7 | ||||||||
| R02D3.7.1 | |||||||||
| CE18101 | |||||||||
| Other_name | CELE_R02D3.7 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | rcat-1 | ||||||||
| DB_info | Database | AceView | gene | 4B8 | |||||
| WormQTL | gene | WBGene00019824 | |||||||
| WormFlux | gene | WBGene00019824 | |||||||
| NDB | locus_tag | CELE_R02D3.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019824|UniProtKB=O44505 | |||||||
| family | PTHR33936 | ||||||||
| NCBI | gene | 176844 | |||||||
| RefSeq | protein | NM_067485.6 | |||||||
| TREEFAM | TREEFAM_ID | TF343889 | |||||||
| TrEMBL | UniProtAcc | O44505 | |||||||
| UniProt_GCRP | UniProtAcc | O44505 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 26 Jan 2024 23:28:21 | WBPerson51134 | Name_change | CGC_name | rcat-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rcat | ||||||||
| Allele (33) | |||||||||
| Strain | WBStrain00032185 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (23) | |||||||||
| Paralog (11) | |||||||||
| Structured_description | Automated_description | Expressed in body wall musculature; excretory cell; head muscle; seam cell; and ventral nerve cord. Is predicted to encode a protein with the following domain: Zinc finger C2H2-type. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R02D3.7 | |||||||
| Corresponding_transcript | R02D3.7.1 | ||||||||
| Other_sequence | CR05767 | ||||||||
| CRC01752_1 | |||||||||
| CBC02628_1 | |||||||||
| Associated_feature | WBsf651609 | ||||||||
| WBsf978693 | |||||||||
| WBsf981658 | |||||||||
| WBsf995112 | |||||||||
| WBsf995113 | |||||||||
| WBsf1016527 | |||||||||
| WBsf229657 | |||||||||
| WBsf229658 | |||||||||
| WBsf229659 | |||||||||
| Gene_product_binds (3958) | |||||||||
| Transcription_factor | WBTranscriptionFactor000755 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00034531 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00051128 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00017316 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00062323 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr7626 | ||||||||
| Expr1010529 | |||||||||
| Expr1038591 | |||||||||
| Expr1154837 | |||||||||
| Expr1200069 | |||||||||
| Expr2005316 | |||||||||
| Expr2023536 | |||||||||
| Drives_construct | WBCnstr00012771 | ||||||||
| WBCnstr00025570 | |||||||||
| Construct_product | WBCnstr00016552 | ||||||||
| WBCnstr00016713 | |||||||||
| WBCnstr00025570 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (116) | |||||||||
| Interaction (30) | |||||||||
| Map_info | Map | IV | Position | -26.7756 | |||||
| Positive | Positive_clone | R02D3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00062517 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
