WormBase Tree Display for Gene: WBGene00019823
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WBGene00019823 | SMap | S_parent | Sequence | R02D3 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | fnta-1 | Person_evidence | WBPerson114 | |||||
Sequence_name | R02D3.5 | ||||||||
Molecular_name | R02D3.5 | ||||||||
R02D3.5.1 | |||||||||
CE18099 | |||||||||
Other_name | CELE_R02D3.5 | Accession_evidence | NDB | BX284604 | |||||
Public_name | fnta-1 | ||||||||
DB_info | Database (12) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 10 Sep 2008 16:37:04 | WBPerson2970 | Name_change | CGC_name | fnta-1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | fnta | ||||||||
Allele (35) | |||||||||
Strain | WBStrain00035533 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (13) | |||||||||
Contained_in_operon | CEOP4008 | ||||||||
Ortholog (34) | |||||||||
Paralog | WBGene00019778 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Enables protein farnesyltransferase activity. Predicted to be located in cytoplasm. Predicted to be part of CAAX-protein geranylgeranyltransferase complex and protein farnesyltransferase complex. Is an ortholog of human FNTA (farnesyltransferase, CAAX box, alpha). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | R02D3.5 | |||||||
Corresponding_transcript | R02D3.5.1 | ||||||||
Other_sequence (69) | |||||||||
Associated_feature | WBsf651608 | ||||||||
WBsf667695 | |||||||||
WBsf995106 | |||||||||
WBsf995107 | |||||||||
WBsf1016523 | |||||||||
WBsf1016524 | |||||||||
WBsf229652 | |||||||||
WBsf229653 | |||||||||
WBsf229654 | |||||||||
WBsf229655 | |||||||||
Experimental_info | RNAi_result (23) | ||||||||
Expr_pattern | Expr1019943 | ||||||||
Expr1038590 | |||||||||
Expr1154835 | |||||||||
Expr2011863 | |||||||||
Expr2030101 | |||||||||
Microarray_results (18) | |||||||||
Expression_cluster (98) | |||||||||
Interaction (30) | |||||||||
Map_info | Map | IV | Position | -26.794 | Error | 0.005927 | |||
Positive | Positive_clone | R02D3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00035302 | ||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00064071 | |||||||||
WBPaper00064972 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |