WormBase Tree Display for Gene: WBGene00019822
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| WBGene00019822 | SMap | S_parent | Sequence | R02D3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ints-13 | Person_evidence | WBPerson5934 | |||||
| Sequence_name | R02D3.4 | ||||||||
| Molecular_name | R02D3.4a | ||||||||
| R02D3.4a.1 | |||||||||
| CE18098 | |||||||||
| R02D3.4b | |||||||||
| CE48559 | |||||||||
| R02D3.4c | |||||||||
| CE48722 | |||||||||
| R02D3.4b.1 | |||||||||
| R02D3.4c.1 | |||||||||
| Other_name | CELE_R02D3.4 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | ints-13 | ||||||||
| DB_info | Database | AceView | gene | 4A986 | |||||
| WormQTL | gene | WBGene00019822 | |||||||
| WormFlux | gene | WBGene00019822 | |||||||
| NDB | locus_tag | CELE_R02D3.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019822|UniProtKB=O44500 | |||||||
| family | PTHR12955 | ||||||||
| NCBI | gene | 176839 | |||||||
| RefSeq | protein | NM_001379999.1 | |||||||
| NM_001380000.1 | |||||||||
| NM_067480.5 | |||||||||
| TrEMBL | UniProtAcc | U4PCN0 | |||||||
| O44500 | |||||||||
| U4PN35 | |||||||||
| UniProt_GCRP | UniProtAcc | O44500 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 20 May 2019 14:10:26 | WBPerson1983 | Name_change | CGC_name | ints-13 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ints | ||||||||
| Allele (82) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00032558 | ||||||||
| 00032559 | |||||||||
| 00032560 | |||||||||
| 00032561 | |||||||||
| 00032562 | |||||||||
| 00032563 | |||||||||
| 00032564 | |||||||||
| 00032565 | |||||||||
| 00032566 | |||||||||
| Contained_in_operon | CEOP4008 | ||||||||
| Ortholog (32) | |||||||||
| Structured_description | Automated_description | Predicted to be involved in centrosome localization and regulation of mitotic cell cycle. Predicted to be located in nucleus and perinuclear region of cytoplasm. Predicted to be part of integrator complex. Is an ortholog of human INTS13 (integrator complex subunit 13). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R02D3.4a | |||||||
| R02D3.4b | |||||||||
| R02D3.4c | |||||||||
| Corresponding_transcript | R02D3.4a.1 | ||||||||
| R02D3.4b.1 | |||||||||
| R02D3.4c.1 | |||||||||
| Other_sequence | CRC05857_1 | ||||||||
| CBC14657_1 | |||||||||
| Dviv_isotig11857 | |||||||||
| CRC08229_1 | |||||||||
| CBC06609_1 | |||||||||
| CJC08110_1 | |||||||||
| Associated_feature | WBsf667694 | ||||||||
| WBsf995104 | |||||||||
| WBsf995105 | |||||||||
| WBsf1016521 | |||||||||
| WBsf1016522 | |||||||||
| WBsf229651 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00017314 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00051125 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00034529 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00076587 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1023752 | ||||||||
| Expr1038589 | |||||||||
| Expr1154834 | |||||||||
| Expr2005315 | |||||||||
| Expr2023535 | |||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (74) | |||||||||
| Interaction | WBInteraction000258501 | ||||||||
| WBInteraction000290422 | |||||||||
| WBInteraction000549152 | |||||||||
| WBInteraction000560320 | |||||||||
| Map_info | Map | IV | Position | -26.7969 | |||||
| Positive | Positive_clone | R02D3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00056284 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
