WormBase Tree Display for Gene: WBGene00019819
expand all nodes | collapse all nodes | view schema
| WBGene00019819 | SMap | S_parent | Sequence | R02D3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | aass-1 | |||||||
| Sequence_name | R02D3.1 | ||||||||
| Molecular_name | R02D3.1a | ||||||||
| R02D3.1a.1 | |||||||||
| CE18095 | |||||||||
| R02D3.1b | |||||||||
| CE48677 | |||||||||
| R02D3.1b.1 | |||||||||
| Other_name | CELE_R02D3.1 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | aass-1 | ||||||||
| DB_info | Database | AceView | gene | 4B3 | |||||
| WormQTL | gene | WBGene00019819 | |||||||
| WormFlux | gene | WBGene00019819 | |||||||
| NDB | locus_tag | CELE_R02D3.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019819|UniProtKB=U4PFH6 | |||||||
| family | PTHR11133 | ||||||||
| NCBI | gene | 176842 | |||||||
| RefSeq | protein | NM_001307729.4 | |||||||
| NM_067483.6 | |||||||||
| TrEMBL | UniProtAcc | U4PFH6 | |||||||
| O44503 | |||||||||
| UniProt_GCRP | UniProtAcc | U4PFH6 | |||||||
| OMIM | gene | 605113 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 16 Jan 2018 11:32:43 | WBPerson1983 | Name_change | CGC_name | aass-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | aass | ||||||||
| Allele (82) | |||||||||
| Strain | WBStrain00031714 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00032586 | ||||||||
| 00032587 | |||||||||
| 00032588 | |||||||||
| 00032589 | |||||||||
| 00032590 | |||||||||
| 00032591 | |||||||||
| 00032592 | |||||||||
| 00032593 | |||||||||
| 00032594 | |||||||||
| 00032595 | |||||||||
| Ortholog (36) | |||||||||
| Structured_description (2) | |||||||||
| Disease_info | Potential_model | DOID:9274 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:17366) | ||||
| Molecular_info | Corresponding_CDS | R02D3.1a | |||||||
| R02D3.1b | |||||||||
| Corresponding_transcript | R02D3.1a.1 | ||||||||
| R02D3.1b.1 | |||||||||
| Other_sequence (74) | |||||||||
| Associated_feature (11) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00051122 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00017312 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00017315 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00034526 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00078534 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00078635 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr14637 | ||||||||
| Expr14640 | |||||||||
| Expr1022640 | |||||||||
| Expr1038586 | |||||||||
| Expr1154831 | |||||||||
| Expr2005313 | |||||||||
| Expr2023533 | |||||||||
| Drives_construct | WBCnstr00025572 | ||||||||
| WBCnstr00041188 | |||||||||
| WBCnstr00041191 | |||||||||
| Construct_product | WBCnstr00025572 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (191) | |||||||||
| Interaction (39) | |||||||||
| Map_info | Map | IV | Position | -26.7789 | |||||
| Positive | Positive_clone | R02D3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00055974 | |||||||||
| WBPaper00065272 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
