WormBase Tree Display for Gene: WBGene00019741
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WBGene00019741 | SMap | S_parent | Sequence | M02H5 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | nhr-201 | Person_evidence | WBPerson600 | |||
Sequence_name | M02H5.3 | ||||||
Molecular_name | M02H5.3 | ||||||
M02H5.3.1 | |||||||
CE50748 | |||||||
M02H5.3.2 | |||||||
Other_name | M02H5.f | Curator_confirmed | WBPerson1983 | ||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||
CELE_M02H5.3 | Accession_evidence | NDB | BX284605 | ||||
Public_name | nhr-201 | ||||||
DB_info | Database | AceView | gene | 5A943 | |||
WormQTL | gene | WBGene00019741 | |||||
WormFlux | gene | WBGene00019741 | |||||
NDB | locus_tag | CELE_M02H5.3 | |||||
Panther | gene | CAEEL|WormBase=WBGene00019741|UniProtKB=Q966H7 | |||||
family | PTHR45680 | ||||||
NCBI | gene | 187408 | |||||
RefSeq | protein | NM_001392466.1 | |||||
TREEFAM | TREEFAM_ID | TF315604 | |||||
TrEMBL | UniProtAcc | Q966H7 | |||||
UniProt_GCRP | UniProtAcc | Q966H7 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | nhr | ||||||
Allele (128) | |||||||
Strain | WBStrain00036841 | ||||||
WBStrain00037534 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00090957 | ||||||
00090958 | |||||||
00090959 | |||||||
00090960 | |||||||
00124515 | |||||||
00124516 | |||||||
00124517 | |||||||
00124518 | |||||||
Ortholog (71) | |||||||
Paralog (218) | |||||||
Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | M02H5.3 | |||||
Corresponding_CDS_history | M02H5.3:wp248 | ||||||
Corresponding_transcript | M02H5.3.1 | ||||||
M02H5.3.2 | |||||||
Other_sequence | CSC00143_1 | ||||||
FD514389.1 | |||||||
Associated_feature | WBsf646631 | ||||||
WBsf646632 | |||||||
WBsf978390 | |||||||
WBsf231333 | |||||||
WBsf231334 | |||||||
Transcription_factor | WBTranscriptionFactor000836 | ||||||
Experimental_info | RNAi_result | WBRNAi00017142 | Inferred_automatically | RNAi_primary | |||
WBRNAi00050836 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1014926 | ||||||
Expr1038534 | |||||||
Expr1154530 | |||||||
Expr2014104 | |||||||
Expr2032343 | |||||||
Drives_construct | WBCnstr00025632 | ||||||
Construct_product | WBCnstr00025632 | ||||||
Microarray_results (18) | |||||||
Expression_cluster (135) | |||||||
Interaction | WBInteraction000585325 | ||||||
Map_info | Map | V | Position | -19.992 | |||
Positive | Positive_clone | M02H5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00062289 | ||||||
WBPaper00062515 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |