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WormBase Tree Display for Gene: WBGene00019741

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Name Class

WBGene00019741SMapS_parentSequenceM02H5
IdentityVersion2
NameCGC_namenhr-201Person_evidenceWBPerson600
Sequence_nameM02H5.3
Molecular_nameM02H5.3
M02H5.3.1
CE50748
M02H5.3.2
Other_nameM02H5.fCurator_confirmedWBPerson1983
RemarkOld cosmid naming mapped via unique overlapping PCR_product on CDSs
CELE_M02H5.3Accession_evidenceNDBBX284605
Public_namenhr-201
DB_infoDatabaseAceViewgene5A943
WormQTLgeneWBGene00019741
WormFluxgeneWBGene00019741
NDBlocus_tagCELE_M02H5.3
PanthergeneCAEEL|WormBase=WBGene00019741|UniProtKB=Q966H7
familyPTHR45680
NCBIgene187408
RefSeqproteinNM_001392466.1
TREEFAMTREEFAM_IDTF315604
TrEMBLUniProtAccQ966H7
UniProt_GCRPUniProtAccQ966H7
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:02WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
222 Jul 2005 10:29:12WBPerson2970Name_changeCGC_namenhr-201
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
AlleleWBVar01518163
WBVar01518164
WBVar01518165
WBVar01518166
WBVar01518167
WBVar01518168
WBVar01518169
WBVar01518170
WBVar01518171
WBVar01518172
WBVar01518173
WBVar01518174
WBVar01518175
WBVar01499528
WBVar01518176
WBVar01518177
WBVar01518178
WBVar02107178
WBVar01518179
WBVar02107179
WBVar02107180
WBVar01518180
WBVar01518181
WBVar01518182
WBVar01499167
WBVar01518183
WBVar02082527
WBVar01518184
WBVar01518185
WBVar02082528
WBVar01518186
WBVar01483346
WBVar02082529
WBVar01518187
WBVar01518188
WBVar01518189
WBVar02122833
WBVar01518190
WBVar01518191
WBVar01518192
WBVar01518193
WBVar01518194
WBVar01518195
WBVar00447834
WBVar00447835
WBVar01499740
WBVar00447836
WBVar00447837
WBVar00447838
WBVar00447839
WBVar00447840
WBVar01609662
WBVar01828267
WBVar01773647
WBVar01773648
WBVar01773649
WBVar01773650
WBVar01773651
WBVar01498849
WBVar01773652
WBVar01498850
WBVar01457532
WBVar01499775
WBVar01457533
WBVar01457534
WBVar00146280
WBVar01924050
WBVar02120511
WBVar01899130
WBVar02150833
WBVar01518129
WBVar01518130
WBVar01518131
WBVar01518132
WBVar00979721
WBVar01518133
WBVar01518134
WBVar00979722
WBVar00979723
WBVar01518135
WBVar01518136
WBVar00979724
WBVar01499674
WBVar00979725
WBVar01518137
WBVar01499675
WBVar01518138
WBVar00979726
WBVar00979727
WBVar01518139
WBVar00278336
WBVar00979728
WBVar01518140
WBVar01518141
WBVar00979729
WBVar01518142
WBVar00979730
WBVar01518143
WBVar00979731
WBVar01518144
WBVar00979732
WBVar01518145
WBVar00979733
WBVar00979734
WBVar01518146
WBVar00979735
WBVar01518147
WBVar00979736
WBVar01518148
WBVar00979737
WBVar01518149
WBVar01518150
WBVar00603465
WBVar01518151
WBVar01518152
WBVar00603466
WBVar00603467
WBVar01518153
WBVar01518154
WBVar01518155
WBVar01518156
WBVar01518157
WBVar01518158
WBVar01518159
WBVar01518160
WBVar01518161
WBVar01500066
WBVar01518162
StrainWBStrain00036841
WBStrain00037534
RNASeq_FPKM (74)
GO_annotation00090957
00090958
00090959
00090960
00124515
00124516
00124517
00124518
OrthologWBGene00156305Caenorhabditis brenneriFrom_analysisOMA
WBGene00024610Caenorhabditis briggsaeFrom_analysisOMA
WormBase-Compara
WBGene00138671Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00056744Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00056745Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00190327Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00193542Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00024608Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00223242Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g8922Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP26.g10573Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g10575Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g19591Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g19592Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g19593Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g19595Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g6121Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g18903Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g18904Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g18905Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g18906Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g18907Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g8416Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g1764Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP38.g11807Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g11808Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g15585Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g15586Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g15587Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g15588Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g15589Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g15590Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g15591Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g15592Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g15593Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g15594Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g15595Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g15596Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g15597Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g15598Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g15599Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g15601Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g15602Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g15603Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g1936Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g20405Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g20408Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g5881Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g5882Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g5883Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g2705Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g4748Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g4749Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g21176Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g21177Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00199.g6819Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00199.g6820Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00199.g6821Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00498.g11557Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_V.g17695Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_V.g17697Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold463.g1549Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold463.g1550Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00653.g14046Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00653.g14047Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_02672Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_020082Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_020083Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrV_pilon.g13007Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00242085Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00288616Trichuris murisFrom_analysisWormBase-Compara
Paralog (218)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSM02H5.3
Corresponding_CDS_historyM02H5.3:wp248
Corresponding_transcriptM02H5.3.1
M02H5.3.2
Other_sequenceCSC00143_1
FD514389.1
Associated_featureWBsf646631
WBsf646632
WBsf978390
WBsf231333
WBsf231334
Transcription_factorWBTranscriptionFactor000836
Experimental_infoRNAi_resultWBRNAi00017142Inferred_automaticallyRNAi_primary
WBRNAi00050836Inferred_automaticallyRNAi_primary
Expr_patternExpr1014926
Expr1038534
Expr1154530
Expr2014104
Expr2032343
Drives_constructWBCnstr00025632
Construct_productWBCnstr00025632
Microarray_results (18)
Expression_cluster (135)
InteractionWBInteraction000585325
Map_infoMapVPosition-19.992
PositivePositive_cloneM02H5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00062289
WBPaper00062515
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene