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WormBase Tree Display for Gene: WBGene00019546

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Name Class

WBGene00019546SMapS_parentSequenceCHROMOSOME_IV
IdentityVersion2
NameCGC_nameglct-6Person_evidenceWBPerson1983
Sequence_nameW07G9.2
Molecular_nameW07G9.2a
W07G9.2a.1
CE39798
W07G9.2b
CE50307
W07G9.2c
CE50304
W07G9.2b.1
W07G9.2c.1
Other_nameK09B3.2
W07G9.aCurator_confirmedWBPerson1983
RemarkOld cosmid naming mapped via unique overlapping PCR_product on CDSs
CELE_W07G9.2Accession_evidenceNDBBX284604
Public_nameglct-6
DB_infoDatabaseAceViewgene4E555
WormFluxgeneWBGene00019546
NDBlocus_tagCELE_W07G9.2
PanthergeneCAEEL|WormBase=W07G9.2b|UniProtKB=A0A0K3AUF6
familyPTHR10896
NCBIgene4363062
RefSeqproteinNM_001380161.2
NM_001313036.3
NM_001313035.3
KEGGKEGG_id2.4.1.135
NemaPathKEGG_id2.4.1.135
TrEMBLUniProtAccA0A0K3ARJ9
A0A0K3AUF6
G4SN66
UniProt_GCRPUniProtAccA0A0K3AUF6
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:01WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
217 Sep 2008 13:35:32WBPerson2970Name_changeCGC_nameglct-6
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classglct
AlleleWBVar01481674
WBVar01481675
WBVar01481676
WBVar02052457
WBVar01481677
WBVar01481678
WBVar01481679
WBVar00900765
WBVar01481680
WBVar01481681
WBVar00900766
WBVar00270472
WBVar01481682
WBVar00900767
WBVar00270473
WBVar01481683
WBVar00900768
WBVar00270474
WBVar00900769
WBVar01481684
WBVar00270475
WBVar01481685
WBVar00900770
WBVar00900771
WBVar00270476
WBVar01481686
WBVar00900772
WBVar00270477
WBVar00900773
WBVar00900774
WBVar00900775
WBVar02020452
WBVar00900776
WBVar00900777
WBVar00900778
WBVar00900779
WBVar00900780
WBVar00900781
WBVar00900782
WBVar00900783
WBVar00900784
WBVar00900785
WBVar00900786
WBVar02003786
WBVar00900787
WBVar02003787
WBVar00900788
WBVar02003788
WBVar02003789
WBVar00900789
WBVar00900790
WBVar00900791
WBVar00900792
WBVar00900793
WBVar00900794
WBVar00900795
WBVar02121195
WBVar00900796
WBVar00900797
WBVar01923046
WBVar00900798
WBVar00900799
WBVar00900800
WBVar00900801
WBVar00900802
WBVar02008202
WBVar00900803
WBVar00900804
WBVar00900805
WBVar00900806
WBVar01966031
WBVar00900807
WBVar01966032
WBVar00900808
WBVar01966033
WBVar00900809
WBVar00900810
WBVar01966034
WBVar00900811
WBVar01966035
WBVar00900812
WBVar01966036
WBVar01966037
WBVar00900813
WBVar00571668
WBVar00900814
WBVar00900815
WBVar02047124
WBVar00900816
WBVar02047125
WBVar00900817
WBVar00900818
WBVar00900819
WBVar00900820
WBVar00900821
WBVar00900822
WBVar01515296
WBVar01904309
WBVar01990771
WBVar01990772
WBVar00421964
WBVar00421965
WBVar00421966
WBVar00421967
WBVar00421968
WBVar01499633
WBVar00421969
WBVar00421970
WBVar02073336
WBVar00421971
WBVar00421972
WBVar00421973
WBVar00421974
WBVar01940507
WBVar00421975
WBVar00421976
WBVar01668587
WBVar00421977
WBVar00421978
WBVar02151365
WBVar01668588
WBVar02086680
WBVar01668589
WBVar01668590
WBVar00187885
WBVar00187886
WBVar00187887
WBVar00187888
WBVar00187889
WBVar00187890
WBVar01944860
WBVar00187891
WBVar00187892
WBVar00187893
WBVar00187894
WBVar01580785
WBVar01997192
WBVar01580786
WBVar01580787
WBVar01649589
WBVar01580788
WBVar01649590
WBVar01649591
WBVar01786308
WBVar01451919
WBVar00246672
WBVar02013497
RNASeq_FPKM (74)
GO_annotation (16)
Ortholog (49)
ParalogWBGene00008160Caenorhabditis elegansFrom_analysisInparanoid_8
WormBase-Compara
WBGene00008293Caenorhabditis elegansFrom_analysisInparanoid_8
WormBase-Compara
WBGene00008479Caenorhabditis elegansFrom_analysisInparanoid_8
WormBase-Compara
WBGene00011650Caenorhabditis elegansFrom_analysisInparanoid_8
WormBase-Compara
WBGene00011781Caenorhabditis elegansFrom_analysisInparanoid_8
WormBase-Compara
WBGene00005026Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity. Predicted to be involved in carbohydrate metabolic process and chondroitin sulfate proteoglycan biosynthetic process. Predicted to be located in Golgi membrane. Human ortholog(s) of this gene implicated in Barrett's esophagus and schizophrenia. Is an ortholog of human B3GAT1 (beta-1,3-glucuronyltransferase 1) and B3GAT2 (beta-1,3-glucuronyltransferase 2).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:9206Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:922)
DOID:5419Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:922)
Molecular_infoCorresponding_CDSW07G9.2a
W07G9.2b
W07G9.2c
Corresponding_CDS_historyK09B3.2:wp154
Corresponding_transcriptW07G9.2a.1
W07G9.2b.1
W07G9.2c.1
Other_sequenceAcan_isotig04721
ACC38686_1
EY460287.1
BU665944.1
AS13682
CJC00145_1
ACC32967_1
Acan_isotig04720
NAC00723_1
EY461809.1
Associated_feature (12)
Experimental_infoRNAi_resultWBRNAi00103571Inferred_automaticallyRNAi_primary
WBRNAi00078601Inferred_automaticallyRNAi_primary
WBRNAi00034186Inferred_automaticallyRNAi_primary
WBRNAi00019710Inferred_automaticallyRNAi_primary
WBRNAi00016876Inferred_automaticallyRNAi_primary
WBRNAi00050378Inferred_automaticallyRNAi_primary
WBRNAi00115913Inferred_automaticallyRNAi_primary
WBRNAi00078668Inferred_automaticallyRNAi_primary
Expr_patternExpr1016151
Expr1038448
Expr1158502
Expr2012085
Expr2030321
Drives_constructWBCnstr00025774
Construct_productWBCnstr00025774
Microarray_results (20)
Expression_cluster (145)
InteractionWBInteraction000274526
WBInteraction000379723
WBInteraction000389797
Map_infoMapIVPosition-2.25846Error0.014484
PositivePositive_cloneW07G9Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00038491
WBPaper00055090
WBPaper00065080
WBPaper00065331
RemarkK09B3.2 renamed W07G9.2Curator_confirmedWBPerson1867
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene