WormBase Tree Display for Gene: WBGene00019432
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| WBGene00019432 | SMap | S_parent | Sequence | K06A5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | knl-2 | Paper_evidence | WBPaper00029157 | |||||
| Person_evidence | WBPerson283 | ||||||||
| Sequence_name | K06A5.4 | ||||||||
| Molecular_name | K06A5.4 | ||||||||
| K06A5.4.1 | |||||||||
| CE26645 | |||||||||
| Other_name | let-380 | Person_evidence | WBPerson533 | ||||||
| CELE_K06A5.4 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | knl-2 | ||||||||
| DB_info | Database | AceView | gene | 1H39 | |||||
| WormQTL | gene | WBGene00019432 | |||||||
| WormFlux | gene | WBGene00019432 | |||||||
| NDB | locus_tag | CELE_K06A5.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019432|UniProtKB=O44548 | |||||||
| family | PTHR16124 | ||||||||
| NCBI | gene | 172350 | |||||||
| RefSeq | protein | NM_001380547.1 | |||||||
| SwissProt | UniProtAcc | O44548 | |||||||
| TREEFAM | TREEFAM_ID | TF342996 | |||||||
| UniProt_GCRP | UniProtAcc | O44548 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 04 Jun 2007 15:54:19 | WBPerson2970 | Name_change | CGC_name | knl-2 | ||||
| 3 | 02 Mar 2015 14:25:40 | WBPerson2970 | Event | Acquires_merge | WBGene00002600 | ||||
| Name_change | Other_name | let-380 | |||||||
| Acquires_merge | WBGene00002600 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | knl | ||||||||
| Allele (42) | |||||||||
| Legacy_information | [McDowall JS] Early larval lethal | ||||||||
| [C.elegansII] h80 : late larval lethal. OA2: h675, h831. [Howell et al. 1987; KR] | |||||||||
| Strain | WBStrain00023680 | ||||||||
| WBStrain00036592 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (16) | |||||||||
| Ortholog (19) | |||||||||
| Structured_description | Automated_description | Predicted to be involved in cell division; chromosome segregation; and meiotic cell cycle. Located in kinetochore and nucleus. Is an ortholog of human MIS18BP1 (MIS18 binding protein 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K06A5.4 | |||||||
| Corresponding_transcript | K06A5.4.1 | ||||||||
| Other_sequence | CRC07009_1 | ||||||||
| CBC05858_1 | |||||||||
| CJC13524_1 | |||||||||
| CRC01117_1 | |||||||||
| CR02307 | |||||||||
| CRC02642_1 | |||||||||
| CJC04736_1 | |||||||||
| CR03767 | |||||||||
| Associated_feature (14) | |||||||||
| Experimental_info | RNAi_result (24) | ||||||||
| Expr_pattern | Expr8317 | ||||||||
| Expr1015488 | |||||||||
| Expr1038396 | |||||||||
| Expr1153724 | |||||||||
| Expr2012973 | |||||||||
| Expr2031205 | |||||||||
| Drives_construct | WBCnstr00008169 | ||||||||
| WBCnstr00025841 | |||||||||
| Construct_product | WBCnstr00000899 | ||||||||
| WBCnstr00005352 | |||||||||
| WBCnstr00008169 | |||||||||
| WBCnstr00025841 | |||||||||
| Antibody | WBAntibody00001236 | ||||||||
| WBAntibody00002322 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (187) | |||||||||
| Interaction (55) | |||||||||
| Map_info | Map | I | Position | 1.12496 | Error | 0.00299 | |||
| Positive | Positive_clone | K06A5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Negative | Negative_clone | C03F7 | |||||||
| C29F10 | |||||||||
| C32G12 | |||||||||
| C40A4 | |||||||||
| C48E7 | |||||||||
| K04F10 | |||||||||
| ZC338 | |||||||||
| Mapping_data | 2_point | 2544 | |||||||
| Multi_point | 1030 | ||||||||
| Pos_neg_data (14) | |||||||||
| Pseudo_map_position | |||||||||
| Reference (14) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| [McDowall JS] Extrachromosomal arrays containing two or three cosmids generated, then manipulated genetically. | |||||||||
| Method | Gene |
