WormBase Tree Display for Gene: WBGene00019427
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| WBGene00019427 | SMap | S_parent | Sequence | K06A1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | atg-16.2 | Person_evidence | WBPerson649 | |||||
| Sequence_name | K06A1.5 | ||||||||
| Molecular_name | K06A1.5 | ||||||||
| K06A1.5.1 | |||||||||
| CE39948 | |||||||||
| Other_name | CELE_K06A1.5 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | atg-16.2 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 29 Feb 2008 11:29:01 | WBPerson2970 | Name_change | CGC_name | atg-16.2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | atg | ||||||||
| Allele (30) | |||||||||
| Strain | WBStrain00033048 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (18) | |||||||||
| Contained_in_operon | CEOP2729 | ||||||||
| Ortholog (36) | |||||||||
| Paralog | WBGene00017178 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description (2) | |||||||||
| Disease_info | Potential_model | DOID:0110885 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:21498) | ||||
| Molecular_info | Corresponding_CDS | K06A1.5 | |||||||
| Corresponding_CDS_history | K06A1.5:wp155 | ||||||||
| Corresponding_transcript | K06A1.5.1 | ||||||||
| Other_sequence | CJC03860_1 | ||||||||
| CR11609 | |||||||||
| CR01569 | |||||||||
| Oden_isotig18752 | |||||||||
| CRC02235_1 | |||||||||
| ES739747.1 | |||||||||
| CRC00622_1 | |||||||||
| HBC05383_1 | |||||||||
| CR05733 | |||||||||
| Associated_feature | WBsf650147 | ||||||||
| WBsf665614 | |||||||||
| WBsf223177 | |||||||||
| WBsf223178 | |||||||||
| WBsf223179 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00016651 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00092352 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00081157 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00102245 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00050018 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00092351 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00034001 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr11435 | ||||||||
| Expr1014835 | |||||||||
| Expr1038392 | |||||||||
| Expr1153711 | |||||||||
| Expr2009488 | |||||||||
| Expr2027725 | |||||||||
| Drives_construct | WBCnstr00025846 | ||||||||
| Construct_product | WBCnstr00019037 | ||||||||
| WBCnstr00025846 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (137) | |||||||||
| Interaction (34) | |||||||||
| Map_info | Map | II | Position | -0.237977 | Error | 0.00254 | |||
| Positive | Positive_clone | K06A1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (20) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
