WormBase Tree Display for Gene: WBGene00019403
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| WBGene00019403 | SMap | S_parent | Sequence | K05B2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | K05B2.2 | |||||||
| Molecular_name (12) | |||||||||
| Other_name | CELE_K05B2.2 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | K05B2.2 | ||||||||
| DB_info | Database | AceView | gene | XF529 | |||||
| WormQTL | gene | WBGene00019403 | |||||||
| WormFlux | gene | WBGene00019403 | |||||||
| NDB | locus_tag | CELE_K05B2.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019403|UniProtKB=Q9GYN5 | |||||||
| family | PTHR15286 | ||||||||
| NCBI | gene | 180764 | |||||||
| RefSeq | protein | NM_001038466.6 | |||||||
| NM_001392769.1 | |||||||||
| TREEFAM | TREEFAM_ID | TF318385 | |||||||
| TrEMBL | UniProtAcc | Q3HKC3 | |||||||
| Q9GYN5 | |||||||||
| UniProt_GCRP | UniProtAcc | Q9GYN5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (138) | |||||||||
| In_cluster | conserved_miRNA_siRNA_cluster | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (35) | |||||||||
| Structured_description | Automated_description | Expressed in several structures, including head muscle; interfacial epithelial cell; pharyngeal muscle cell; rectal gland cell; and vulva. Human ortholog(s) of this gene implicated in cholangiocarcinoma. Is predicted to encode a protein with the following domains: N-terminal RASSF family; Ras association (RalGDS/AF-6) domain; and Ubiquitin-like domain superfamily. Is an ortholog of human RASSF7 (Ras association domain family member 7). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:4947 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:13232) | ||||
| Molecular_info | Corresponding_CDS | K05B2.2a | |||||||
| K05B2.2b | |||||||||
| Corresponding_CDS_history | K05B2.2:wp149 | ||||||||
| Corresponding_transcript | K05B2.2a.1 | ||||||||
| K05B2.2a.2 | |||||||||
| K05B2.2b.1 | |||||||||
| K05B2.2b.2 | |||||||||
| K05B2.2b.3 | |||||||||
| K05B2.2b.4 | |||||||||
| K05B2.2b.5 | |||||||||
| K05B2.2b.6 | |||||||||
| Other_sequence (19) | |||||||||
| Associated_feature (16) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00016616 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00016617 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00049965 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr11322 | ||||||||
| Expr1023623 | |||||||||
| Expr1038378 | |||||||||
| Expr1153661 | |||||||||
| Expr2004782 | |||||||||
| Expr2023005 | |||||||||
| Drives_construct | WBCnstr00018772 | ||||||||
| WBCnstr00025864 | |||||||||
| Construct_product | WBCnstr00025864 | ||||||||
| Microarray_results (27) | |||||||||
| Expression_cluster (94) | |||||||||
| Interaction | WBInteraction000387825 | ||||||||
| WBInteraction000387935 | |||||||||
| Map_info | Positive | Positive_clone | K05B2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -6.21825 | |||||||
| Reference | WBPaper00027766 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
