WormBase Tree Display for Gene: WBGene00019381
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| WBGene00019381 | SMap | S_parent | Sequence | K04C2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | K04C2.3 | |||||||
| Molecular_name | K04C2.3a | ||||||||
| K04C2.3a.1 | |||||||||
| CE00721 | |||||||||
| K04C2.3b | |||||||||
| CE32689 | |||||||||
| K04C2.3b.1 | |||||||||
| Other_name | CELE_K04C2.3 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | K04C2.3 | ||||||||
| DB_info | Database | AceView | gene | 3H963 | |||||
| WormQTL | gene | WBGene00019381 | |||||||
| WormFlux | gene | WBGene00019381 | |||||||
| NDB | locus_tag | CELE_K04C2.3 | |||||||
| NCBI | gene | 175958 | |||||||
| RefSeq | protein | NM_001379781.1 | |||||||
| NM_066095.9 | |||||||||
| TrEMBL | UniProtAcc | Q8IG09 | |||||||
| H2L0E2 | |||||||||
| UniProt_GCRP | UniProtAcc | H2L0E2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele | WBVar01499890 | ||||||||
| WBVar01499891 | |||||||||
| WBVar01500260 | |||||||||
| WBVar01446346 | |||||||||
| WBVar00836189 | |||||||||
| WBVar00836190 | |||||||||
| WBVar00836191 | |||||||||
| WBVar00836192 | |||||||||
| WBVar01499774 | |||||||||
| WBVar01264809 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (18) | |||||||||
| Structured_description | Automated_description | Enriched in germ line; intestine; muscle cell; and neurons based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray; tiling array; and RNA-seq studies. Is affected by ten chemicals including rotenone; Zidovudine; and Rifampin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS (2) | ||||||||
| Corresponding_transcript | K04C2.3a.1 | ||||||||
| K04C2.3b.1 | |||||||||
| Other_sequence | CJC10386_1 | ||||||||
| CBC01887_1 | |||||||||
| Associated_feature | WBsf645298 | ||||||||
| WBsf992891 | |||||||||
| WBsf992892 | |||||||||
| WBsf1015165 | |||||||||
| WBsf1015166 | |||||||||
| WBsf225162 | |||||||||
| WBsf225163 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00016585 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00005768 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00033577 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00062305 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00049890 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026382 | ||||||||
| Expr1038371 | |||||||||
| Expr1153594 | |||||||||
| Expr2004760 | |||||||||
| Expr2022984 | |||||||||
| Drives_construct | WBCnstr00025876 | ||||||||
| Construct_product | WBCnstr00025876 | ||||||||
| Microarray_results | SMD_K04C2.3 | ||||||||
| 173684_s_at | |||||||||
| A_12_P114960 | |||||||||
| A_12_P117288 | |||||||||
| A_12_P139915 | |||||||||
| A_12_P139916 | |||||||||
| A_12_P139917 | |||||||||
| A_12_P139918 | |||||||||
| A_12_P139919 | |||||||||
| Aff_K04C2.3 | |||||||||
| GPL13394_WBGene00019381 | |||||||||
| GPL13914_K04C2.3 | |||||||||
| GPL14144_K04C2.3a_193-252_0.933_2_A | |||||||||
| GPL14144_K04C2.3a_37-96_0.633_20_C | |||||||||
| GPL14144_K04C2.3a_77-136_0.939_1_B | |||||||||
| GPL19516_CGZ0027745 | |||||||||
| GPL19516_CGZ0027746 | |||||||||
| GPL19516_CGZ0027747 | |||||||||
| GPL21109_K04C2.3a.1 | |||||||||
| GPL3518_CE00721 | |||||||||
| GPL8304_CE_WBGene00019381_A | |||||||||
| GPL8304_CE_WBGene00019381_B | |||||||||
| GPL8673_K04C2_3aP00151 | |||||||||
| GPL8673_K04C2_3aP00182 | |||||||||
| GPL8673_K04C2_3aP00190 | |||||||||
| GPL8673_K04C2_3bP00001 | |||||||||
| GPL8673_K04C2_3bP00029 | |||||||||
| GPL8673_K04C2_3bP00053 | |||||||||
| GPL9450_K04C2.3a | |||||||||
| GPL9450_K04C2.3b | |||||||||
| cea2.c.21233 | |||||||||
| cea2.d.32065 | |||||||||
| Expression_cluster (132) | |||||||||
| Interaction (76) | |||||||||
| Map_info | Positive | Positive_clone | K04C2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -0.910833 | |||||||
| Reference | WBPaper00040537 | ||||||||
| Method | Gene |
