WormBase Tree Display for Gene: WBGene00019351
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| WBGene00019351 | SMap | S_parent | Sequence | K03A1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | lron-7 | Person_evidence | WBPerson637 | |||||
| Sequence_name | K03A1.2 | ||||||||
| Molecular_name | K03A1.2a | ||||||||
| K03A1.2a.1 | |||||||||
| CE30088 | |||||||||
| K03A1.2b | |||||||||
| CE41142 | |||||||||
| K03A1.2c | |||||||||
| CE53310 | |||||||||
| K03A1.2b.1 | |||||||||
| K03A1.2c.1 | |||||||||
| Other_name | CELE_K03A1.2 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | lron-7 | ||||||||
| DB_info | Database | AceView | gene | XH913 | |||||
| WormQTL | gene | WBGene00019351 | |||||||
| WormFlux | gene | WBGene00019351 | |||||||
| NDB | locus_tag | CELE_K03A1.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019351|UniProtKB=Q21164 | |||||||
| family | PTHR24370 | ||||||||
| NCBI | gene | 180991 | |||||||
| RefSeq | protein | NM_076826.9 | |||||||
| NM_001129688.5 | |||||||||
| NM_001373353.1 | |||||||||
| TrEMBL | UniProtAcc | A0A4V0IJI7 | |||||||
| H2L0D5 | |||||||||
| Q21164 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A4V0IJI7 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 09 Dec 2011 15:47:23 | WBPerson2970 | Name_change | CGC_name | lron-7 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | lron | ||||||||
| Allele (58) | |||||||||
| Strain | WBStrain00047614 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00003760 | ||||||||
| 00003761 | |||||||||
| 00003762 | |||||||||
| 00003763 | |||||||||
| 00003764 | |||||||||
| 00003765 | |||||||||
| 00003766 | |||||||||
| 00003767 | |||||||||
| 00003768 | |||||||||
| Ortholog (15) | |||||||||
| Structured_description | Automated_description | Predicted to enable chromatin binding activity. Predicted to be involved in chromatin organization and establishment of protein localization to chromatin. Predicted to be located in membrane. Predicted to be part of nuclear origin of replication recognition complex. Expressed in head. Is an ortholog of human OPTC (opticin). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K03A1.2a | |||||||
| K03A1.2b | |||||||||
| K03A1.2c | |||||||||
| Corresponding_CDS_history | K03A1.2:wp176 | ||||||||
| Corresponding_transcript | K03A1.2a.1 | ||||||||
| K03A1.2b.1 | |||||||||
| K03A1.2c.1 | |||||||||
| Other_sequence | CJC07917_1 | ||||||||
| CR09510 | |||||||||
| CR11260 | |||||||||
| Oden_isotig17175 | |||||||||
| CJC08395_1 | |||||||||
| CR02494 | |||||||||
| CRC00877_1 | |||||||||
| Associated_feature | WBsf662370 | ||||||||
| WBsf1005796 | |||||||||
| WBsf235912 | |||||||||
| WBsf235913 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00000879 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00016503 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00049780 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00033902 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr9909 | ||||||||
| Expr1024708 | |||||||||
| Expr1038362 | |||||||||
| Expr1153495 | |||||||||
| Expr2013280 | |||||||||
| Expr2031511 | |||||||||
| Drives_construct | WBCnstr00014395 | ||||||||
| WBCnstr00025896 | |||||||||
| Construct_product | WBCnstr00014395 | ||||||||
| WBCnstr00025896 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (132) | |||||||||
| Interaction (105) | |||||||||
| Map_info | Map | X | Position | -1.78116 | |||||
| Positive | Positive_clone | K03A1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00055090 | ||||||||
| WBPaper00058384 | |||||||||
| WBPaper00063743 | |||||||||
| WBPaper00064805 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
