WormBase Tree Display for Gene: WBGene00019349
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| WBGene00019349 | SMap | S_parent | Sequence | K02H11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | trx-5 | Person_evidence | WBPerson5260 | |||||
| Sequence_name | K02H11.6 | ||||||||
| Molecular_name | K02H11.6 | ||||||||
| K02H11.6.1 | |||||||||
| CE30379 | |||||||||
| Other_name | CELE_K02H11.6 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | trx-5 | ||||||||
| DB_info | Database | AceView | gene | 5C6 | |||||
| WormQTL | gene | WBGene00019349 | |||||||
| WormFlux | gene | WBGene00019349 | |||||||
| NDB | locus_tag | CELE_K02H11.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019349|UniProtKB=O61985 | |||||||
| family | PTHR13871 | ||||||||
| NCBI | gene | 186914 | |||||||
| RefSeq | protein | NM_071039.2 | |||||||
| TREEFAM | TREEFAM_ID | TF331873 | |||||||
| TrEMBL | UniProtAcc | O61985 | |||||||
| UniProt_GCRP | UniProtAcc | O61985 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 06 Apr 2011 08:50:57 | WBPerson2970 | Name_change | CGC_name | trx-5 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | trx | ||||||||
| Allele (22) | |||||||||
| Strain | WBStrain00032331 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00124223 | ||||||||
| 00124224 | |||||||||
| Ortholog (42) | |||||||||
| Paralog (11) | |||||||||
| Structured_description | Automated_description | Predicted to be involved in photoreceptor cell maintenance and sensory perception. Is an ortholog of human NXNL2 (nucleoredoxin like 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K02H11.6 | |||||||
| Corresponding_transcript | K02H11.6.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00049776 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1017479 | ||||||||
| Expr1153491 | |||||||||
| Expr2017522 | |||||||||
| Drives_construct | WBCnstr00025898 | ||||||||
| Construct_product | WBCnstr00025898 | ||||||||
| Microarray_results (13) | |||||||||
| Expression_cluster (45) | |||||||||
| Interaction (29) | |||||||||
| Map_info | Map | V | Position | -18.6113 | Error | 0.004261 | |||
| Positive | Positive_clone | K02H11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00041408 | |||||||||
| WBPaper00055070 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
